RNA–Protein interactions for RNA: ENST00000318304.12

PPFIBP1-202, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-202ENST00000318304 ETV3LQ6ZN32 361 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 PAQR8Q8TEZ7 354 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 MRPL48Q96GC5 212 aaKnown RBP6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 Q96M85 177 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 HSPA12BQ96MM6 686 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 MENTQ9BUN1 341 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 ACTRT3Q9BYD9 372 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 TRPV4Q9HBA0 871 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 CCL26Q9Y258 94 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 SHANK1Q9Y566 2161 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 A0A1W2PPE3 182 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 GGT3PA6NGU5 568 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 WASH3PC4AMC7 463 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 GRM6O15303 877 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 BCL2L11O43521 198 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 XRCC3O43542 346 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 RNGTTO60942 597 aaKnown RBP6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 CLEC3AO75596 197 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 MAS1P04201 325 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 RD3LP0DJH9 198 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR8G3PP0DMU2 310 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 GPR1P46091 355 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 ARFIP1P53367 373 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 DHRS2Q13268 280 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 TPGS2Q68CL5 300 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 MFSD12Q6NUT3 480 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 STEAP1BQ6NZ63 245 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 SLC48A1Q6P1K1 146 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 C3orf33Q6P1S2 294 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 UQCC3Q6UW78 93 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 PARS2Q7L3T8 475 aaKnown RBP6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR4N5Q8IXE1 308 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 CDK20Q8IZL9 346 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 ZNF511Q8NB15 262 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR10R2Q8NGX6 335 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 SFXN5Q8TD22 340 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 DTD2Q96FN9 168 aa6.92□□□□□ -1.3
PPFIBP1-202ENST00000318304 TSPAN11A1L157 253 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 CD8AP01732 235 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 S100A9P06702 114 aaKnown RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ABOP16442 354 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ACTA2P62736 377 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ACTG2P63267 376 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 HTRA4P83105 476 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 C11orf87Q6NUJ2 197 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ABHD17CQ6PCB6 329 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR5M8Q8NGP6 311 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ZPLD1Q8TCW7 415 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ELP5Q8TE02 316 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 GRHL3Q8TE85 626 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 TMED6Q8WW62 240 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 PHYHIPQ92561 330 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 FGF13Q92913 245 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 CPNE2Q96FN4 548 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 CNN2Q99439 309 aaKnown RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 SPSB2Q99619 263 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ACKR4Q9NPB9 350 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 PCOLCE2Q9UKZ9 415 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 CPED1A4D0V7 1026 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 COLCA2A8K830 154 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR2F2O95006 317 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 EEF1A1P68104 462 aaKnown RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR2F1Q13607 317 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 FHL1Q13642 323 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 PON3Q15166 354 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 FAM109BQ6ICB4 259 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 USP53Q70EK8 1073 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 TMCO2Q7Z6W1 182 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 GTPBP8Q8N3Z3 284 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 STEAP2Q8NFT2 490 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR4K14Q8NGD5 310 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR51A4Q8NGJ6 313 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 OR1J2Q8NGS2 313 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 MS4A6EQ96DS6 147 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 MYADMQ96S97 322 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 NMNAT3Q96T66 252 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ZMAT3Q9HA38 289 aaKnown RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 TREM1Q9NP99 234 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ICAM5Q9UMF0 924 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 IER3IP1Q9Y5U9 82 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 NOTCH4Q99466 2003 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 A0A1W2PRU2 124 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 TMEM82A0PJX8 343 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 GNB5O14775 395 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 PRICKLE3O43900 615 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 NGFRP08138 427 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 SMIM6P0DI80 62 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 CALCBP10092 127 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 AK4P27144 223 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 MNDAP41218 407 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 RPS27P42677 84 aaKnown RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ILF3Q12906 894 aaKnown RBP eCLIP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ODF4Q2M2E3 257 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 LIPNQ5VXI9 398 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 GLT8D1Q68CQ7 371 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ZNF813Q6ZN06 617 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 RANBP3LQ86VV4 465 aaPredicted RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 RNF113BQ8IZP6 322 aaKnown RBP6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 SHISA5Q8N114 240 aa6.91□□□□□ -1.3
PPFIBP1-202ENST00000318304 ARMC10Q8N2F6 343 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms