RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 GPR35Q9HC97 309 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 CMTM6Q9NX76 183 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 CSPG4Q6UVK1 2322 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 NIPBLQ6KC79 2804 aaeCLIP14.23□□□□□ -0.13
LSM1-201ENST00000311351 IGHV1-18A0A0C4DH31 117 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 C11orf98E9PRG8 122 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 RPL36A-HNRNPH2H7BZ11 118 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 M0R3G1 203 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 PLPP3O14495 311 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 CH25HO95992 272 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 MT-ATP6P00846 226 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 AHCYP23526 432 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 OR1E2P47887 323 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 SEC24CP53992 1094 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 SH3BGRP55822 239 aaPredicted RBP14.23□□□□□ -0.13
LSM1-201ENST00000311351 UBE2NP61088 152 aaKnown RBP14.23□□□□□ -0.13
LSM1-201ENST00000311351 ZNF74Q16587 644 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 CYBRD1Q53TN4 286 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 ANKRD16Q6P6B7 361 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 NHLRC1Q6VVB1 395 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 SPATA21Q7Z572 469 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 BIVMQ86UB2 503 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 MICU2Q8IYU8 434 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 LRRC17Q8N6Y2 441 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 OR5J2Q8NH18 312 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 RP9Q8TA86 221 aaKnown RBP14.23□□□□□ -0.13
LSM1-201ENST00000311351 ELAC2Q9BQ52 826 aaKnown RBP14.23□□□□□ -0.13
LSM1-201ENST00000311351 ZNF426Q9BUY5 554 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 FAM107BQ9H098 131 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 SEC61A2Q9H9S3 476 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 FAIMQ9NVQ4 179 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 GDF2Q9UK05 429 aaPredicted RBP14.23□□□□□ -0.13
LSM1-201ENST00000311351 BAG5Q9UL15 447 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 NOX1Q9Y5S8 564 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 ATP23Q9Y6H3 246 aa14.23□□□□□ -0.13
LSM1-201ENST00000311351 ARPC4-TTLL3A0A0A6YYG9 625 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 ELOVL7A1L3X0 281 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 SLC35F4A4IF30 521 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 ZNF503-AS2A6NEH8 195 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 CCDC22O60826 627 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 IGHV4-39P01824 125 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 ADORA3P0DMS8 318 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 TTKP33981 857 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 UGT2B15P54855 530 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 TAS2R41P59536 307 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 CAMK2DQ13557 499 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 C11orf71Q6IPW1 123 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 SLC46A3Q7Z3Q1 461 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 NKAIN4Q8IVV8 208 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 SLC15A3Q8IY34 581 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 C20orf196Q8IYI0 205 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 PFN4Q8NHR9 129 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 TRMT61AQ96FX7 289 aaKnown RBP14.22□□□□□ -0.13
LSM1-201ENST00000311351 MPP4Q96JB8 637 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 SLC38A2Q96QD8 506 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 DHRS9Q9BPW9 319 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 FKRPQ9H9S5 495 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 OBP2BQ9NPH6 170 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 MEPEQ9NQ76 525 aaPredicted RBP14.22□□□□□ -0.13
LSM1-201ENST00000311351 MOKQ9UQ07 419 aa14.22□□□□□ -0.13
LSM1-201ENST00000311351 CR1P17927 2039 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 NME4O00746 187 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 IFNA14P01570 189 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 CELA3BP08861 270 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 KDELR2P33947 212 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 FABP6P51161 128 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 SLC7A2P52569 658 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 LIPEQ05469 1076 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 PIN1Q13526 163 aaPredicted RBP14.21□□□□□ -0.13
LSM1-201ENST00000311351 MELKQ14680 651 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 AGAP6Q5VW22 663 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 CLEC9AQ6UXN8 241 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 ARPINQ7Z6K5 226 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 PXKQ7Z7A4 578 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 MYPOPQ86VE0 399 aaPredicted RBP14.21□□□□□ -0.13
LSM1-201ENST00000311351 DEPDC4Q8N2C3 294 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 MAGEE2Q8TD90 523 aaPredicted RBP14.21□□□□□ -0.13
LSM1-201ENST00000311351 TMEM255BQ8WV15 326 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 TPD52L3Q96J77 140 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 BDH2Q9BUT1 245 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 CACNG6Q9BXT2 260 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 NANSQ9NR45 359 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 ARFGEF3Q5TH69 2177 aa14.21□□□□□ -0.13
LSM1-201ENST00000311351 FN1P02751 2386 aaKnown RBP14.2□□□□□ -0.14
LSM1-201ENST00000311351 OR5F1O95221 314 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 OR6A2O95222 327 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 CECR9P0C854 216 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 UMPSP11172 480 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 IFNGR1P15260 489 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 ACVR1BP36896 505 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 NUDT2P50583 147 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 BIDP55957 195 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 TNK1Q13470 666 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 CLEC12BQ2HXU8 276 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 C1QTNF12Q5T7M4 302 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 C8orf82Q6P1X6 216 aaPredicted RBP14.2□□□□□ -0.14
LSM1-201ENST00000311351 FBXL14Q8N1E6 418 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 MUC15Q8N387 334 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 ANKK1Q8NFD2 765 aa14.2□□□□□ -0.14
LSM1-201ENST00000311351 HTRA1Q92743 480 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms