RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DAPK2Q9UIK4 370 aa19.18■□□□□ 0.66
ATG4D-201ENST00000309469 FARSAQ9Y285 508 aaKnown RBP19.18■□□□□ 0.66
ATG4D-201ENST00000309469 GPR179Q6PRD1 2367 aa19.18■□□□□ 0.66
ATG4D-201ENST00000309469 PCNX3Q9H6A9 2034 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 XKRYO14609 159 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 MAGEB4O15481 346 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-201ENST00000309469 RGS9O75916 674 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-201ENST00000309469 MT-CO3P00414 261 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 OTX2P32243 289 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 ACVR1BP36896 505 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 TGM4P49221 684 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 SSR4P51571 173 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 HSF2Q03933 536 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 MFSD13AQ14CX5 517 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 WDSUB1Q8N9V3 476 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 DRAXINQ8NBI3 349 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-201ENST00000309469 POC1BQ8TC44 478 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 TXNIPQ9H3M7 391 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 TBCCD1Q9NVR7 557 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 FBXL2Q9UKC9 423 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 POLHQ9Y253 713 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 EFNA2O43921 213 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 IL11P20809 199 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 SPEM2Q0P670 501 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 HNRNPA0Q13151 305 aaKnown RBP19.17■□□□□ 0.66
ATG4D-201ENST00000309469 PRAMEF20Q5VT98 475 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 EEF1A1P5Q5VTE0 462 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 TMEM81Q6P7N7 255 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 RPTNQ6XPR3 784 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 SLC16A9Q7RTY1 509 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 FADS6Q8N9I5 356 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 ZNF519Q8TB69 540 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 THAP4Q8WY91 577 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 MRPL48Q96GC5 212 aaKnown RBP19.17■□□□□ 0.66
ATG4D-201ENST00000309469 FRMD6Q96NE9 622 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 POTEKPQ9BYX7 375 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 SYT4Q9H2B2 425 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 KIF26BQ2KJY2 2108 aa19.17■□□□□ 0.66
ATG4D-201ENST00000309469 IQCMA0A1B0GVH7 501 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 A0A1W2PNU3 283 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-201ENST00000309469 MASP2O00187 686 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 IGHMP01871 453 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 TFPIP10646 304 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 GBX2P52951 348 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-201ENST00000309469 MLF1P58340 268 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 SLC3A1Q07837 685 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 SSPNQ14714 243 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 OR7A5Q15622 319 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 TRAM1Q15629 374 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 TRIM16LQ309B1 348 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 DMKNQ6E0U4 476 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-201ENST00000309469 PM20D2Q8IYS1 436 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 ARMC10Q8N2F6 343 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 OR4K17Q8NGC6 315 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 NEIL3Q8TAT5 605 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 PELI1Q96FA3 418 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 MROQ9BYG7 248 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 PLEKHB1Q9UF11 243 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-201ENST00000309469 ST6GALNAC2Q9UJ37 374 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 GRIP1Q9Y3R0 1128 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 KMT2EQ8IZD2 1858 aa19.16■□□□□ 0.66
ATG4D-201ENST00000309469 CCDC187A0A096LP49 1063 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 FAM47E-STBD1D6RA91 191 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 CASKO14936 926 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 TRIM3O75382 744 aaPredicted RBP19.15■□□□□ 0.66
ATG4D-201ENST00000309469 F8A1P23610 371 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 ETV6P41212 452 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 ZP4Q12836 540 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 SPANXN2Q5MJ10 180 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 H1FNTQ75WM6 255 aaPredicted RBP19.15■□□□□ 0.66
ATG4D-201ENST00000309469 CCDC190Q86UF4 302 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 TIGD4Q8IY51 512 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 DND1Q8IYX4 353 aaKnown RBP19.15■□□□□ 0.66
ATG4D-201ENST00000309469 PARP16Q8N5Y8 322 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 SCAIQ8N9R8 606 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 SUMF1Q8NBK3 374 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 NXPE2Q96DL1 559 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 CEP19Q96LK0 163 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 SNX18Q96RF0 628 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 KCNN2Q9H2S1 579 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 SERINC1Q9NRX5 453 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 PRSS37A4D1T9 235 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 MS4A18H0YCH9 400 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 OGG1O15527 345 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 UPK1BO75841 260 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 IMPDH2P12268 514 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 ICAM2P13598 275 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 GTF2E2P29084 291 aaKnown RBP19.15■□□□□ 0.66
ATG4D-201ENST00000309469 MS4A18Q3C1V0 323 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 TMEM164Q5U3C3 297 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 ZNF248Q8NDW4 579 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 CCDC86Q9H6F5 360 aaKnown RBP19.15■□□□□ 0.66
ATG4D-201ENST00000309469 PTGES2Q9H7Z7 377 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 FOXJ2Q9P0K8 574 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 GNG8Q9UK08 70 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 PCDHGA1Q9Y5H4 931 aa19.15■□□□□ 0.66
ATG4D-201ENST00000309469 A0A1W2PRG6 482 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 H3BML4 177 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 TNFSF8P32971 234 aa19.14■□□□□ 0.65
ATG4D-201ENST00000309469 RPS15P62841 145 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms