RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PRH1P02810 166 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 SPARCP09486 303 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 RAP2BP61225 183 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 EIF2B1Q14232 305 aaKnown RBP11.63□□□□□ -0.55
RETREG3-201ENST00000309428 LINC00303Q3SY05 128 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 GLT8D1Q68CQ7 371 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TMUB2Q71RG4 321 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 OR51S1Q8NGJ8 323 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 COX14Q96I36 57 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 OR1F2PQ96R84 312 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 MAP3K3Q99759 626 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TRIM2Q9C040 744 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 MAN2C1Q9NTJ4 1040 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 C2orf42Q9NWW7 574 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TSPAN11A1L157 253 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 URADA6NGE7 173 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 K7EQS6 105 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 EPPINO95925 133 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 ATP1B1P05026 303 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF10P21506 573 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TBXA2RP21731 343 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 AKR1C3P42330 323 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 C19orf57Q0VDD7 668 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 ARHGAP40Q5TG30 622 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 LRFN4Q6PJG9 635 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 SLC35D2Q76EJ3 337 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 SLC35F2Q8IXU6 374 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 CAMKVQ8NCB2 501 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 C12orf57Q99622 126 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 HRASLSQ9HDD0 168 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 FANCFQ9NPI8 374 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 GDE1Q9NZC3 331 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 LIPT1Q9Y234 373 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 CSTAP01040 98 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 SBK2P0C263 348 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 AKT2P31751 481 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 DLSTP36957 453 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 HMGA2P52926 109 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TNK1Q13470 666 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 ALG11Q2TAA5 492 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 C1orf94Q6P1W5 598 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TSSK4Q6SA08 328 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 DGAT2L6Q6ZPD8 337 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 TRILQ7L0X0 811 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 CAMKMTQ7Z624 323 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 CMIPQ8IY22 773 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 GOT1L1Q8NHS2 421 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-201ENST00000309428 WNT2BQ93097 391 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 ACSS1Q9NUB1 689 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-201ENST00000309428 MPDZO75970 2070 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 KRBOX1C9JBD0 128 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SLC25A12O75746 678 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 RAB3DO95716 219 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 GPANK1O95872 356 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 CD2P06729 351 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SFTPBP07988 381 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 CCR9P51686 369 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SIRPAP78324 504 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ENPP2Q13822 863 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 RBM39Q14498 530 aaKnown RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ARHGAP19Q14CB8 494 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF620Q6ZNG0 422 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM91Q6ZNR0 172 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 C16orf47Q6ZP98 133 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 RHOUQ7L0Q8 258 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ABHD13Q7L211 337 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF101Q8IZC7 436 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 OR10R2Q8NGX6 335 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SDF2Q99470 211 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 TEX101Q9BY14 249 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 MTHFD2LQ9H903 347 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ASB6Q9NWX5 421 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 LRIT1Q9P2V4 623 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 LSM2Q9Y333 95 aaKnown RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 IGHV3-20A0A0C4DH32 117 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 GLAP06280 429 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 LPLP06858 475 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SEC61A1P61619 476 aaKnown RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 GUCA2AQ02747 115 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM35AQ53FP2 167 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 CLLU1Q5K131 121 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 FAM219AQ8IW50 185 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 RFLNBQ8N5W9 214 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 OR52N1Q8NH53 320 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 RASD2Q96D21 266 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 NBASA2RRP1 2371 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 METTL21EPA6NDL7 271 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SURF4O15260 269 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 PRAMEF2O60811 474 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ZIC2O95409 532 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ANKRD34CP0C6C1 535 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 HNRNPA2B1P22626 353 aaKnown RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 PRSS3P35030 304 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 FAM76BQ5HYJ3 339 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 CD300LFQ8TDQ1 290 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 WDR89Q96FK6 387 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms