RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 WDR34Q96EX3 536 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MFFQ9GZY8 342 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RRAGCQ9HB90 399 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC5A10A0PJK1 596 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 F8W036 122 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 hCG_2039718K7EN88 272 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CLDN7O95471 211 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CFDP00746 253 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 NDUFB7P17568 137 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NAT1P18440 290 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 APLNRP35414 380 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GINS1Q14691 196 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 VWA2Q5GFL6 755 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZBTB37Q5TC79 503 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SYPL2Q5VXT5 272 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR7E24Q6IFN5 339 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PLXDC2Q6UX71 529 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ACOT4Q8N9L9 421 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZDHHC1Q8WTX9 485 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ABHD6Q9BV23 337 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 STBD1O95210 358 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC48A1Q6P1K1 146 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GRASPQ7Z6J2 395 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZNF679Q8IYX0 411 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PCNPQ8WW12 178 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 ST8SIA4Q92187 359 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CAPNS2Q96L46 248 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CNTNAP3Q9BZ76 1288 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 THYN1Q9P016 225 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 VWA8A3KMH1 1905 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FBLL1A6NHQ2 334 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 LEFTY1O75610 366 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 IFI30P13284 250 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 OMGP23515 440 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RAD52P43351 418 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PSMB3P49720 205 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 P2RX1P51575 399 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TLE2Q04725 743 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CAMK2BQ13554 666 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PDLIM3Q53GG5 364 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 ADGRG3Q86Y34 549 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF426Q9BUY5 554 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TMED9Q9BVK6 235 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 UBQLN3Q9H347 655 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MED16Q9Y2X0 877 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ALDH3B1P43353 468 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 DEFA6Q01524 100 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 WDR73Q6P4I2 378 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MDGA2Q7Z553 956 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 FAM129CQ86XR2 697 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 GPR26Q8NDV2 337 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SDR9C7Q8NEX9 313 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 APOBEC3BQ9UH17 382 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 SULT2B1O00204 365 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CLIC3O95833 236 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SERPINA7P05543 415 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SARGQ9BW04 601 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 C20orf85Q9H1P6 137 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 S1PR5Q9H228 398 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SIRT7Q9NRC8 400 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 UBE2Q2LH0YL09 131 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ALX3O95076 343 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A6P0DMU7 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A5P0DMU8 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A7P0DMV0 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A8P0DMV1 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A9P0DMV2 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A2Q5DJT8 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A1Q5HYN5 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SOHLH1Q5JUK2 328 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 OR4F3Q6IEY1 312 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CT45A3Q8NHU0 189 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MOCOSQ96EN8 888 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PTRH2Q9Y3E5 179 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 EEF1E1-BLOC1S5C9J1V9 151 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MTX2O75431 263 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CPMP14384 443 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PBX2P40425 430 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 AKR1C2P52895 323 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF684Q5T5D7 378 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 BRICD5Q6PL45 260 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 GLIS3Q8NEA6 775 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SYNPRQ8TBG9 265 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SEH1LQ96EE3 360 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TMEM59Q9BXS4 323 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 FXYD6-FXYD2A0A087WZ82 144 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 LILRA5A6NI73 299 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 C1SP09871 688 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CD46P15529 392 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RAB7AP51149 207 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CTXN1P60606 82 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 NAAAQ02083 359 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF322Q6U7Q0 402 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 MCATQ8IVS2 390 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 C3orf30Q96M34 536 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MARVELD1Q9BSK0 173 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 DEFB126Q9BYW3 111 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 FXYD6Q9H0Q3 95 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 UBE2NP61088 152 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms