RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PRDM7Q9NQW5 492 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 PARP14Q460N5 1801 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 VSTM2BA6NLU5 285 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 SLC35E2P0CK97 266 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
DDX54-201ENST00000306014 SLC6A8P48029 635 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 C20orf141Q9NUB4 165 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 MOKQ9UQ07 419 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 KIR2DS5A0A0G2JLQ3 304 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 A0A0G2JNG1 304 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 IFITM5A6NNB3 132 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 KIR2DS3K7RE56 304 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 UBBP0CG47 229 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 UBCP0CG48 685 aaKnown RBP12.21□□□□□ -0.45
DDX54-201ENST00000306014 APEHP13798 732 aaKnown RBP12.21□□□□□ -0.45
DDX54-201ENST00000306014 KIR2DS5Q14953 304 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 ZXDCQ2QGD7 858 aaPredicted RBP12.21□□□□□ -0.45
DDX54-201ENST00000306014 ZNF585AQ6P3V2 769 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 MED25Q71SY5 747 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 LINC01555Q8NAE3 123 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 MRGPRX3Q96LB0 322 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 STACQ99469 402 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 ARHGDIGQ99819 225 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 SEMA4CQ9C0C4 833 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 EIF5A2Q9GZV4 153 aaKnown RBP12.21□□□□□ -0.45
DDX54-201ENST00000306014 NXF2Q9GZY0 626 aaKnown RBP12.21□□□□□ -0.45
DDX54-201ENST00000306014 OR10A5Q9H207 317 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 WDR76Q9H967 626 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 B3GAT2Q9NPZ5 323 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 PPP4R1LQ9P1A2 415 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 KCNIP3Q9Y2W7 256 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 ATG2BQ96BY7 2078 aa12.21□□□□□ -0.45
DDX54-201ENST00000306014 SULT1B1O43704 296 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 HEXBP07686 556 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 SPI1P17947 270 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 ATF1P18846 271 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 CD53P19397 219 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 ADH6P28332 368 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 DCTDP32321 178 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 CAPZA1P52907 286 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 CCL4L1Q8NHW4 92 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 PATE1Q8WXA2 126 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 FAM3CQ92520 227 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 FAM3DQ96BQ1 224 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 TPSD1Q9BZJ3 242 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 EVA1BQ9NVM1 165 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 PRKNO60260 465 aaPredicted RBP12.21□□□□□ -0.46
DDX54-201ENST00000306014 FADS1O60427 444 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 ZNF14P17017 642 aaPredicted RBP12.21□□□□□ -0.46
DDX54-201ENST00000306014 OR1D4P47884 311 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 MVDP53602 400 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 TAS2R20P59543 309 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 SEC61A1P61619 476 aaKnown RBP12.21□□□□□ -0.46
DDX54-201ENST00000306014 CSNK2A1P68400 391 aaPredicted RBP12.21□□□□□ -0.46
DDX54-201ENST00000306014 SIGIRRQ6IA17 410 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 CSNK2A3Q8NEV1 391 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 ABHD1Q96SE0 405 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 ST6GALNAC5Q9BVH7 336 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 PTGES2Q9H7Z7 377 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 EVA1AQ9H8M9 152 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 SCML1Q9UN30 329 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 EDARQ9UNE0 448 aa12.21□□□□□ -0.46
DDX54-201ENST00000306014 CRTAPO75718 401 aaPredicted RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 OPN1LWP04000 364 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 PTHLHP12272 177 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 FOSL2P15408 326 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 ZNF28P17035 718 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 HTR2CP28335 458 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 DIO1P49895 249 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 CYCSP99999 105 aaKnown RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 MEF2DQ14814 521 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 MLC1Q15049 377 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 OR7A5Q15622 319 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 CD300LDQ6UXZ3 194 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 COX15Q7KZN9 410 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 DHRS9Q9BPW9 319 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 ZNF576Q9H609 170 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 EMC3Q9P0I2 261 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 STEAP1Q9UHE8 339 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 ETV7Q9Y603 341 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 ATP6V1G2-DDX39BF2Z307 99 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 AIPO00170 330 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 CDC42EP2O14613 210 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 OR2T1O43869 369 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 DYRK1AQ13627 763 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 RUNX2Q13950 521 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 GLYATL3Q5SZD4 288 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 AADACL4Q5VUY2 407 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 OTPQ5XKR4 325 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 FOXRED1Q96CU9 486 aaPredicted RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 CNTNAP3BQ96NU0 1288 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 C6orf106Q9H6K1 298 aaPredicted RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 FBXL4Q9UKA2 621 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 CIB4A0PJX0 185 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 E9PI62 339 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 TPOP07202 933 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms