RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
TVP23A-201ENST00000299866 TCEAL8Q8IYN2 117 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 ZPLD1Q8TCW7 415 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 C15orf40Q8WUR7 153 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 FAM117AQ9C073 453 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM27Q9HBJ8 222 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 C14orf105Q9NVL8 296 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 NOP16Q9Y3C1 178 aaKnown RBP11.91□□□□□ -0.5
TVP23A-201ENST00000299866 LAMA2P24043 3122 aaKnown RBP11.91□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM82A0PJX8 343 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 XRCC3O43542 346 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 SLC35G4P0C7Q5 338 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 PSMD4P55036 377 aaKnown RBP11.91□□□□□ -0.5
TVP23A-201ENST00000299866 PRRT3Q5FWE3 981 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 POMGNT2Q8NAT1 580 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 OR2L5Q8NG80 312 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 MENTQ9BUN1 341 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
TVP23A-201ENST00000299866 APOBEC3BQ9UH17 382 aaKnown RBP11.91□□□□□ -0.5
TVP23A-201ENST00000299866 KLF15Q9UIH9 416 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
TVP23A-201ENST00000299866 TRAV8-7A0A075B6U6 113 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 LOC100509620A0A075B734 347 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 MCIDASD6RGH6 385 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ACTL6AO96019 429 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 EPCAMP16422 314 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ITGB8P26012 769 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 PRKCZQ05513 592 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 OR7A5Q15622 319 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ARHGAP11BQ3KRB8 267 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 MTSS1LQ765P7 747 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 LRRTM1Q86UE6 522 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 OR1J2Q8NGS2 313 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 OR2A1Q8NGT9 310 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 CXorf40AQ8TE69 158 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 PHYHIPQ92561 330 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TRPV4Q9HBA0 871 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TBC1D3KA0A087X1G2 549 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 GXYLT2A0PJZ3 443 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TBC1D3BA6NDS4 549 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TBC1D3FA6NER0 549 aaPredicted RBP11.9□□□□□ -0.5
TVP23A-201ENST00000299866 SCAMP1O15126 338 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 NGFRP08138 427 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ERGP11308 486 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 CSF2RBP32927 897 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 PTGFRP43088 359 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 NTHL1P78549 312 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TBC1D3GQ6DHY5 549 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 C11orf87Q6NUJ2 197 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 LGR4Q9BXB1 951 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 SPHK1Q9NYA1 384 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TAS2R8Q9NYW2 309 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 MYEF2Q9P2K5 600 aaKnown RBP11.9□□□□□ -0.5
TVP23A-201ENST00000299866 ICAM5Q9UMF0 924 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 TNFSF18Q9UNG2 199 aa11.9□□□□□ -0.5
TVP23A-201ENST00000299866 GGT3PA6NGU5 568 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF705EA8MWA4 302 aaPredicted RBP11.9□□□□□ -0.51
TVP23A-201ENST00000299866 FARS2O95363 451 aaKnown RBP11.9□□□□□ -0.51
TVP23A-201ENST00000299866 S100A9P06702 114 aaKnown RBP11.9□□□□□ -0.51
TVP23A-201ENST00000299866 PRSS3P35030 304 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 DIO1P49895 249 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 ATP1B3P54709 279 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 MICBQ29980 383 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 SCGB2B2Q4G0G5 96 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 DHRS7BQ6IAN0 325 aaPredicted RBP11.9□□□□□ -0.51
TVP23A-201ENST00000299866 UQCC3Q6UW78 93 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 NRROSQ86YC3 692 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 SLC35F3Q8IY50 421 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF619Q8N2I2 560 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.51
TVP23A-201ENST00000299866 OR10AC1Q8NH08 325 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 OR5AK2Q8NH90 309 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 CCDC107Q8WV48 283 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 ULBP3Q9BZM4 244 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 GAREM1Q9H706 876 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 ZFP57Q9NU63 452 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 STEAP1Q9UHE8 339 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 FARSAQ9Y285 508 aaKnown RBP11.9□□□□□ -0.51
TVP23A-201ENST00000299866 WNT6Q9Y6F9 365 aa11.9□□□□□ -0.51
TVP23A-201ENST00000299866 ALPK2Q86TB3 2170 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 HTTP42858 3142 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 LRG1P02750 347 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 PCCBP05166 539 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 DBIP07108 87 aaKnown RBP11.89□□□□□ -0.51
TVP23A-201ENST00000299866 NID1P14543 1247 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 CD34P28906 385 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 SNRPNP63162 240 aaKnown RBP11.89□□□□□ -0.51
TVP23A-201ENST00000299866 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 Q499Y3 187 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 DCST2Q5T1A1 773 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF227Q86WZ6 799 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 ARMC10Q8N2F6 343 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 LRRC25Q8N386 305 aaPredicted RBP11.89□□□□□ -0.51
TVP23A-201ENST00000299866 COX18Q8N8Q8 333 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms