RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FOXK2Q01167 660 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CDONQ4KMG0 1287 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF595Q8IYB9 648 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HLA-CQ95604 372 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ANKRD9Q96BM1 317 aaPredicted RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NKX3-1Q99801 234 aaPredicted RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BANF2Q9H503 90 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LIN7BQ9HAP6 207 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NRIP3Q9NQ35 241 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MBNL1Q9NR56 388 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ADAMTS5Q9UNA0 930 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC22A23A1A5C7 686 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SULT1C2O00338 296 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF749O43361 778 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AKR7A3O95154 331 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GNB1P62873 340 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LILRA2Q8N149 483 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMEM106AQ96A25 262 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SYT11Q9BT88 431 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PPA2Q9H2U2 334 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RNF167Q9H6Y7 350 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FOXE1O00358 373 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NXPH2O95156 264 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ENPP1P22413 925 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NPY4RP50391 375 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 Q6ZTK2 550 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 A0A1B0GWA3 101 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HCRTR1O43613 425 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FOSL1P15407 271 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DPP4P27487 766 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MZT1Q08AG7 82 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SIAH3Q8IW03 269 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NXPE3Q969Y0 559 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 INPP5EQ9NRR6 644 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SDHAF2Q9NX18 166 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GALR3O60755 368 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DDAH2O95865 285 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HOXD12P35452 270 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CSNK1DP48730 415 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MLF1P58340 268 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GALEQ14376 348 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SYT13Q7L8C5 426 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MYOTQ9UBF9 498 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 STEAP1Q9UHE8 339 aa12.54□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 KCNK5O95279 499 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C5P01031 1676 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 APEX1P27695 318 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PIGAP37287 484 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MFGE8Q08431 387 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GPR176Q14439 515 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ALKAL1Q6UXT8 129 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FAM174AQ8TBP5 190 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SMAP2Q8WU79 429 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MRI1Q9BV20 369 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PITHD1Q9GZP4 211 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 WDR76Q9H967 626 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 IL1AP01583 271 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 IGFBP1P08833 259 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TBCEQ15813 527 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF468Q5VIY5 522 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 EMC6Q9BV81 110 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC19A3Q9BZV2 496 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMEM212A6NML5 194 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ABHD16AO95870 558 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FOLR1P15328 257 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ANXA7P20073 488 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GPR85P60893 370 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLCO4C1Q6ZQN7 724 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR10K1Q8NGX5 313 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SEC22CQ9BRL7 303 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ANKRD19PQ9H560 264 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MARCH5Q9NX47 278 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DVL1O14640 695 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MRPS14O60783 128 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TRIM23P36406 574 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DVL1P1P54792 670 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 REEP5Q00765 189 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LANCL2Q9NS86 450 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C1orf123Q9NWV4 160 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PURGQ9UJV8 347 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FABP7O15540 132 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 P2RX6O15547 441 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SNAPINO95295 136 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CLEC3BP05452 202 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RBMS2Q15434 407 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms