RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ST6GAL1P15907 406 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 FGF7P21781 194 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HSD3B2P26439 372 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 LPAR6P43657 344 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 RHEBQ15382 184 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ISXQ2M1V0 245 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 LCTLQ6UWM7 567 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 CLDN19Q8N6F1 224 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ZNF610Q8N9Z0 462 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ADAMTS17Q8TE56 1095 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 INSM2Q96T92 566 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 ADAM2Q99965 735 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 RGCCQ9H4X1 137 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 NRIP3Q9NQ35 241 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HDGFL3Q9Y3E1 203 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 WIF1Q9Y5W5 379 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 A0A087WUU8 490 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 GNG14A0A1W2PPG7 69 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 XRCC3O43542 346 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BKO60814 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 PRAMEF12O95522 483 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BJP06899 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BOP23527 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BBP33778 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 SOAT1P35610 550 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 OMPP47874 163 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BDP58876 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BCP62807 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST2H2BEQ16778 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 PRRT3Q5FWE3 981 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 CERS6Q6ZMG9 384 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 OR4K14Q8NGD5 310 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 OR1J1Q8NGS3 322 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 RGP1Q92546 391 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BHQ93079 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 TMEM169Q96HH4 297 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 C4orf36Q96KX1 117 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BNQ99877 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 HIST1H2BMQ99879 126 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 OR51B6Q9H340 312 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 INPP5EQ9NRR6 644 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 CNIH4Q9P003 139 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 GXYLT2A0PJZ3 443 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 J3QLW9 94 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 KCNAB3O43448 404 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 CSF1P09603 554 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ALPPL2P10696 532 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 FABP4P15090 132 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ZNF19P17023 458 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 RBM34P42696 430 aaKnown RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 PGFP49763 221 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 ODF4Q2M2E3 257 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 PGGHGQ32M88 737 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 GDPD4Q6W3E5 623 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 PEG10Q86TG7 708 aaKnown RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ZNF775Q96BV0 537 aaPredicted RBP11.93□□□□□ -0.5
MSH2-201ENST00000233146 SYT4Q9H2B2 425 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 TAS2R8Q9NYW2 309 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ST6GALNAC2Q9UJ37 374 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 ZC3H12DA2A288 527 aaKnown RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 RTCAO00442 366 aaKnown RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 NPC1O15118 1278 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 LDLRAD4O15165 306 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 RAMP2O60895 175 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 CTNSO60931 367 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 ARIH2O95376 493 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 METTL15P1P0C7V9 234 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 TIA1P31483 386 aaKnown RBP eCLIP11.92□□□□□ -0.5
MSH2-201ENST00000233146 IRF8Q02556 426 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 PDZD11Q5EBL8 140 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 GDF6Q6KF10 455 aaPredicted RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 HIST2H3AQ71DI3 136 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 RABEPKQ7Z6M1 372 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 SERPINA9Q86WD7 417 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 GID4Q8IVV7 300 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 MR1Q95460 341 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 NTNG2Q96CW9 530 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 SPHK2Q9NRA0 654 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 ADAM18Q9Y3Q7 739 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 A0A0B4J2A0 478 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 AGPAT2O15120 278 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 ZNF208O43345 1280 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 GLSO94925 669 aaPredicted RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 HLA-GP17693 338 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 IGFBP6P24592 240 aaPredicted RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 RGS8P57771 180 aaPredicted RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 OR12D2P58182 307 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 RAB1AP62820 205 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms