RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 HHEXQ03014 270 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 ARSJQ5FYB0 599 aaPredicted RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 FAM209BQ5JX69 171 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 TMEM244Q5VVB8 128 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 PAQR6Q6TCH4 344 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 Q6ZSR9 355 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 OR2G3Q8NGZ4 309 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 CMSS1Q9BQ75 279 aaKnown RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 FAM103A1Q9BTL3 118 aaKnown RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 HRASLSQ9HDD0 168 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 DMRT3Q9NQL9 472 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 KLHL13Q9P2N7 655 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 A0A1B0GUH1 482 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 TIMP1P01033 207 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 QDPRP09417 244 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 CTRB1P17538 263 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 HTR2CP28335 458 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 CD70P32970 193 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 SIM1P81133 766 aaPredicted RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 DLX2Q07687 328 aaPredicted RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 HAGHQ16775 308 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 CTRB2Q6GPI1 263 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 ZNF100Q8IYN0 542 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 OR9K2Q8NGE7 335 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 BSCL2Q96G97 398 aaPredicted RBP9.69□□□□□ -0.86
VCL-201ENST00000211998 TRAPPC4Q9Y296 219 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 OR1A2Q9Y585 309 aa9.69□□□□□ -0.86
VCL-201ENST00000211998 P04436 131 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RAC2P15153 192 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 HNRNPA2B1P22626 353 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 ELAVL4P26378 380 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 CCR7P32248 378 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RAET1LQ5VY80 246 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OGFOD3Q6PK18 319 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OPN5Q6U736 354 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 LCTLQ6UWM7 567 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 BAP18Q8IXM2 172 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 KLHDC8AQ8IYD2 350 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 PIANPQ8IYJ0 282 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 ZNF610Q8N9Z0 462 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 SERINC2Q96SA4 455 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 PAAF1Q9BRP4 392 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RHNO1Q9BSD3 238 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 TCRBV5S2A0A599 114 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OR6C68A6NDL8 312 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RNF212BA8MTL3 300 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 H7BYZ3 331 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 PMP2P02689 132 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 EIF4EP06730 217 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 SMIM6P0DI80 62 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 SRMP19623 302 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 DRD1P21728 446 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 SERTAD2Q14140 314 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 Q499Y3 187 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 EXOSC6Q5RKV6 272 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 MORN1Q5T089 497 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 TMEM217Q8N7C4 229 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OR9A2Q8NGT5 310 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 TSACCQ96A04 125 aaPredicted RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 DDIT4LQ96D03 193 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 AKR1E2Q96JD6 320 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OPALINQ96PE5 141 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 HAPLN2Q9GZV7 340 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 NKX2-4Q9H2Z4 354 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 ELOVL3Q9HB03 270 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 MYO10Q9HD67 2058 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 NUP188Q5SRE5 1749 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 TMEM129A0AVI4 362 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 CEBPZOSA8MTT3 80 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 K7ERQ8 282 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 LATO43561 262 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 H2AFB1P0C5Y9 115 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 SFTA3P0C7M3 94 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 EPHA4P54764 986 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 C19orf57Q0VDD7 668 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 C6orf132Q5T0Z8 1188 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 XAF1Q6GPH4 301 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OR52W1Q6IF63 320 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 FAAP20Q6NZ36 180 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 C17orf99Q6UX52 265 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 RCBTB1Q8NDN9 531 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OR1J2Q8NGS2 313 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 MS4A4EQ96PG1 132 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 ZMAT3Q9HA38 289 aaKnown RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 RHOFQ9HBH0 211 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 KCMF1Q9P0J7 381 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 STEAP1Q9UHE8 339 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 A0A087X0M5 115 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 NPIPA5A0A0B4J1W7 369 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 A0A1B0GX30 115 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 HMX2A2RU54 273 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 TAAR5O14804 337 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 HLA-DOBP13765 273 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 TRHRP34981 398 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms