RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TUBAL3A6NHL2 446 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 RNF13O43567 381 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 SMIM6P0DI80 62 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 CLDN12P56749 244 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 NRG3P56975 720 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF750Q32MQ0 723 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 EOGTQ5NDL2 527 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 HBMQ6B0K9 141 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 CYB5R2Q6BCY4 276 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 TCTN3Q6NUS6 607 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 RDH10Q8IZV5 341 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 SYNPRQ8TBG9 265 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 TMED6Q8WW62 240 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 RXFP3Q9NSD7 469 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 CD207Q9UJ71 328 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 OR5K4A6NMS3 321 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 BET1O15155 118 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 ELK1P19419 428 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 SDHBP21912 280 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF273Q14593 569 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 FCRLAQ7L513 359 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 LRRC56Q8IYG6 542 aaPredicted RBP11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF679Q8IYX0 411 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF619Q8N2I2 560 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 SDR9C7Q8NEX9 313 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 APMAPQ9HDC9 416 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 IER3IP1Q9Y5U9 82 aa11.21□□□□□ -0.61
TSPAN9-201ENST00000011898 TRAV27A0A087WT01 109 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 A0A1W2PS29 197 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SERPINA5P05154 406 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 TMEM65Q6PI78 240 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 FAM111BQ6SJ93 734 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 CBLN2Q8IUK8 224 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 OR52I1Q8NGK6 324 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SFXN5Q8TD22 340 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SMPDL3BQ92485 455 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 POM121Q96HA1 1249 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 C4orf36Q96KX1 117 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 PARP12Q9H0J9 701 aaKnown RBP11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 EXO1Q9UQ84 846 aaKnown RBP11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 LINC00862A6NCI5 91 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 GIPP09681 153 aaPredicted RBP11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 AKAIN1P0CW23 69 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 RAB4BP61018 213 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SNRPGP62308 76 aaKnown RBP11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 CSNK1G2P78368 415 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 RBMS2Q15434 407 aaKnown RBP11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 Q6ZNB5 142 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 ADIPOR2Q86V24 386 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 UCN3Q969E3 161 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SCMH1Q96GD3 660 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 C19orf43Q9BQ61 176 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 CDCA4Q9BXL8 241 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SAMD10Q9BYL1 202 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 LDAHQ9H6V9 325 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 MED20Q9H944 212 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 SIRT5Q9NXA8 310 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 TMEM14AQ9Y6G1 99 aa11.21□□□□□ -0.62
TSPAN9-201ENST00000011898 A0A087X0M5 115 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 A0A1B0GX30 115 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 A8MVJ9 347 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 UPK1AO00322 258 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 OR2T1O43869 369 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 EXOSC7Q15024 291 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 C4orf17Q53FE4 359 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 DCST2Q5T1A1 773 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 PAQR6Q6TCH4 344 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 MEPCEQ7L2J0 689 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 LRRTM1Q86UE6 522 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 FRMD1Q8N878 549 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 PLA2G15Q8NCC3 412 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 LMX1AQ8TE12 382 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 WASF3Q9UPY6 502 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 OR51B4Q9Y5P0 310 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 PVRP15151 417 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 FUT1P19526 365 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 ACHEP22303 614 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 ENPP1P22413 925 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 FPR3P25089 353 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 CTXN1P60606 82 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 EIF2B1Q14232 305 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 GNMTQ14749 295 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 LTB4RQ15722 352 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 SYT14P1Q58G82 188 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 LEG1Q6P5S2 330 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 TMEM71Q6P5X7 295 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 KCTD18Q6PI47 426 aaPredicted RBP11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
TSPAN9-201ENST00000011898 DNM1P34Q6PK57 102 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms