RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SCAIQ8N9R8 606 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 SLC38A2Q96QD8 506 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 TMEM43Q9BTV4 400 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 TMEM120AQ9BXJ8 343 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 B3GAT2Q9NPZ5 323 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 SEC14L4Q9UDX3 406 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 GDF2Q9UK05 429 aaPredicted RBP16.57■□□□□ 0.24
CLN6-213ENST00000636212 MOKQ9UQ07 419 aa16.57■□□□□ 0.24
CLN6-213ENST00000636212 IGKV1D-42A0A075B6H8 117 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 ARPC4-TTLL3A0A0A6YYG9 625 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 ATP6V1G2-DDX39BF2Z307 99 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 RPL36A-HNRNPH2H7BZ11 118 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 FZD7O75084 574 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 OPN1SWP03999 348 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 CDH12P55289 794 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
CLN6-213ENST00000636212 LGALS3BPQ08380 585 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 CLEC2AQ6UVW9 174 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 B3GLCTQ6Y288 498 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 RETREG3Q86VR2 466 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 SNX32Q86XE0 403 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 BCL2L2Q92843 193 aaPredicted RBP16.56■□□□□ 0.24
CLN6-213ENST00000636212 KAT8Q9H7Z6 458 aaKnown RBP16.56■□□□□ 0.24
CLN6-213ENST00000636212 B3GAT1Q9P2W7 334 aa16.56■□□□□ 0.24
CLN6-213ENST00000636212 USF3Q68DE3 2245 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 A0A096LPE4 126 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 A0A1W2PPZ6 126 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 M0R3H8 397 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 CHP2O43745 196 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 NDUFS7O75251 213 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 ZNF432O94892 652 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 OR6A2O95222 327 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 MT-ATP6P00846 226 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 PCGF2P35227 344 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 ARFIP2P53365 341 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 ARF1P84077 181 aaKnown RBP16.55■□□□□ 0.24
CLN6-213ENST00000636212 SELPLGQ14242 412 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 TRMT5Q32P41 509 aaKnown RBP16.55■□□□□ 0.24
CLN6-213ENST00000636212 C3orf36Q3SXR2 165 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 C11orf71Q6IPW1 123 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 CCDC36Q8IYA8 594 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 ARHGDIGQ99819 225 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 ECSITQ9BQ95 431 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 KATNB1Q9BVA0 655 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 RSPO3Q9BXY4 272 aaPredicted RBP16.55■□□□□ 0.24
CLN6-213ENST00000636212 CRLF2Q9HC73 371 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 GPR35Q9HC97 309 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 NOX1Q9Y5S8 564 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 VPS13CQ709C8 3753 aa16.55■□□□□ 0.24
CLN6-213ENST00000636212 IGHV1-18A0A0C4DH31 117 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 CPSF4LA6NMK7 179 aaKnown RBP16.54■□□□□ 0.24
CLN6-213ENST00000636212 ZNF726A6NNF4 738 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 VSTM5A8MXK1 200 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 H7C417 338 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 BGLAPP02818 100 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 AHCYP23526 432 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 CAPZA2P47755 286 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 POU3F1Q03052 451 aaPredicted RBP16.54■□□□□ 0.24
CLN6-213ENST00000636212 PUDPQ08623 228 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 DUSP7Q16829 419 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 CEACAM16Q2WEN9 425 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 ENTPD8Q5MY95 495 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 TTC33Q6PID6 262 aaPredicted RBP16.54■□□□□ 0.24
CLN6-213ENST00000636212 LINGO2Q7L985 606 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 VANGL1Q8TAA9 524 aaPredicted RBP16.54■□□□□ 0.24
CLN6-213ENST00000636212 SLC41A3Q96GZ6 507 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 OR2M2Q96R28 347 aa16.54■□□□□ 0.24
CLN6-213ENST00000636212 MRPL39Q9NYK5 338 aaKnown RBP16.54■□□□□ 0.24
CLN6-213ENST00000636212 ZFHX3Q15911 3703 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 BBIP1A8MTZ0 92 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 INAFM1C9JVW0 142 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 MS4A18H0YCH9 400 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 M0R3G1 203 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 TRAF3IP2O43734 574 aaPredicted RBP16.53■□□□□ 0.24
CLN6-213ENST00000636212 TPST2O60704 377 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 NPPAP01160 153 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 CD247P20963 164 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 SNRPD2P62316 118 aaKnown RBP16.53■□□□□ 0.24
CLN6-213ENST00000636212 VMACQ2NL98 169 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 MS4A18Q3C1V0 323 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 CARD17Q5XLA6 110 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 FAM169BQ8N8A8 192 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 MAPK1IP1LQ8NDC0 245 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 OR6T1Q8NGN1 323 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 OR6N1Q8NGY5 312 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 OR5J2Q8NH18 312 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 PROX1Q92786 737 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 FBXO17Q96EF6 278 aa16.53■□□□□ 0.24
CLN6-213ENST00000636212 TRAPPC13A5PLN9 417 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 ZNF99A8MXY4 864 aaPredicted RBP16.52■□□□□ 0.24
CLN6-213ENST00000636212 HIST1H2ABP04908 130 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 CSF3P09919 207 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 ADORA3P0DMS8 318 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 ARR3P36575 388 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 TUBA1BP68363 451 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 TUBA4AP68366 448 aa16.52■□□□□ 0.24
CLN6-213ENST00000636212 NAAAQ02083 359 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms