RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	GPR148	Q8TDV2	347 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SNAPC3	Q92966	411 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LYRM4	Q9HD34	91 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ACOT13	Q9NPJ3	140 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ABCD2	Q9UBJ2	740 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IGHV5-51	A0A0C4DH38	117 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SCGN	O76038	276 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CDK1	P06493	297 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DBH	P09172	617 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC2A1	P11166	492 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CLDN12	P56749	244 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GABARAPL2	P60520	117 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF836	Q6ZNA1	936 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MEPCE	Q7L2J0	689 aa	Known RBP	13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMEM163	Q8TC26	289 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LHX6	Q9UPM6	363 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NCOR2	Q9Y618	2525 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF850	A8MQ14	1090 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RAD51D	O75771	328 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	AKR7A3	O95154	331 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RLN2	P04090	185 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CSRP1	P21291	193 aa	Known RBP	13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	EIF2S3	P41091	472 aa	Known RBP	13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OXA1L	Q15070	435 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MRPL21	Q7Z2W9	205 aa	Known RBP	13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR4N2	Q8NGD1	307 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR6Q1	Q8NGQ2	317 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ELP5	Q8TE02	316 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ALG12	Q9BV10	488 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMEM38A	Q9H6F2	299 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PCDHGB6	Q9Y5F9	930 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CTDSP2	O14595	271 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IGHG1	P01857	330 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF35	P13682	527 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TRIM23	P36406	574 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TSFM	P43897	325 aa	Known RBP	13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF181	Q2M3W8	571 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NLRP8	Q86W28	1048 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	UCN3	Q969E3	161 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ERVMER34-1	Q9H9K5	563 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BABAM2	Q9NXR7	383 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PCDHGA6	Q9Y5G7	932 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	B3GALT1	Q9Y5Z6	326 aa		13.16	□□□□□ -0.3
NEDD4L-238	ENST00000635997	C1QA	P02745	245 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IL7	P13232	177 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	APEH	P13798	732 aa	Known RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NID1	P14543	1247 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	P2RY14	Q15391	338 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RSU1	Q15404	277 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CCDC107	Q8WV48	283 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CPNE2	Q96FN4	548 aa	Predicted RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	UBQLN3	Q9H347	655 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NT5DC2	Q9H857	520 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DUSP22	Q9NRW4	184 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997		A6NIZ1	184 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RAP1B	P61224	184 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RAP1A	P62834	184 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RAB40B	Q12829	278 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CHRFAM7A	Q494W8	412 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FIP1L1	Q6UN15	594 aa	Known RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ABI3BP	Q7Z7G0	1075 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CA13	Q8N1Q1	262 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SPERT	Q8NA61	448 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR5D18	Q8NGL1	313 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CACNG6	Q9BXT2	260 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	POMT2	Q9UKY4	750 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ADAM18	Q9Y3Q7	739 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IGLV3-16	A0A075B6K0	115 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FIGNL2	A6NMB9	653 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF593	O00488	134 aa	Predicted RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	UPK1B	O75841	260 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PTH	P01270	115 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IFNA21	P01568	189 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	S100A9	P06702	114 aa	Known RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TGFBR3	Q03167	851 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MBOAT2	Q6ZWT7	520 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	THRSP	Q92748	146 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NINJ1	Q92982	152 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SPTSSA	Q969W0	71 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FKBP10	Q96AY3	582 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HAVCR1	Q96D42	359 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF578	Q96N58	590 aa	Predicted RBP	13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FAM60A	Q9NP50	221 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RDH8	Q9NYR8	311 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMPRSS11E	Q9UL52	423 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KCNS2	Q9ULS6	477 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PPIL1	Q9Y3C6	166 aa		13.15	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ACACB	O00763	2458 aa		13.15	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CRTAP	O75718	401 aa	Predicted RBP	13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SULT1C4	O75897	302 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PRKAR1B	P31321	381 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CASP3	P42574	277 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ART1	P52961	327 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZNF793	Q6ZN11	406 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ADGRF3	Q8IZF5	1079 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR9K2	Q8NGE7	335 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	MUCL1	Q96DR8	90 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR5M11	Q96RB7	305 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms