RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 C17orf107Q6ZR85 190 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PRSS48Q7RTY5 328 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 DPPA2Q7Z7J5 298 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CDH26Q8IXH8 852 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 UMODL1-AS1Q8N2C9 162 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 WDR31Q8NA23 367 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CYB561A3Q8NBI2 242 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR1N1Q8NGS0 311 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR5B3Q8NH48 314 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 IGSF8Q969P0 613 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 ITPKCQ96DU7 683 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SUCNR1Q9BXA5 334 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 SLC35D1Q9NTN3 355 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PAQR5Q9NXK6 330 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CNIH4Q9P003 139 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 CSNK1G3Q9Y6M4 447 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 KIDINS220Q9ULH0 1771 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 FZD9O00144 591 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 F7P08709 466 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 LAP3P28838 519 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PTTG1IPP53801 180 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GPLD1P80108 840 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TRNP1Q6NT89 227 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 DPPA4Q7L190 304 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 WFDC8Q8IUA0 241 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM139Q8IV31 216 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SCML4Q8N228 414 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR51A2Q8NGJ7 313 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CHAC2Q8WUX2 184 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 FEVQ99581 238 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 FGFBP2Q9BYJ0 223 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC25A18Q9H1K4 315 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PXDNQ92626 1479 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ANTXRLA6NF34 631 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF785A8K8V0 405 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ARPC3O15145 178 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RFPL3O75679 317 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SCGB1C2P0DMR2 95 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 F3P13726 295 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR1D4P47884 311 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ID4P47928 161 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OLIG2Q13516 323 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TPBGQ13641 420 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR1Q1Q15612 314 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 HNRNPA1L2Q32P51 320 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PODNL1Q6PEZ8 512 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GFRALQ6UXV0 394 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF551Q7Z340 670 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PIWIL3Q7Z3Z3 882 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 C4orf32Q8N8J7 132 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PURGQ9UJV8 347 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ABCC6O95255 1503 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 I6L893 689 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 BAMBIQ13145 260 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GLYR1Q49A26 553 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 YIF1BQ5BJH7 314 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 NHSL2Q5HYW2 709 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF546Q86UE3 836 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR8U1Q8NH10 309 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 FGF13Q92913 245 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLCO2A1Q92959 643 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 DTD2Q96FN9 168 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLC45A3Q96JT2 553 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ATP5SQ99766 215 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SLA2Q9H6Q3 261 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM9BQ9NQ34 198 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CXXC1Q9P0U4 656 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 HSFX1Q9UBD0 423 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 POLDIP2Q9Y2S7 368 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TIMM9Q9Y5J7 89 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ARFGEF2Q9Y6D5 1785 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 LOC285095A0A1B0GVY8 99 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TNFRSF10AO00220 468 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF593O00488 134 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 HS3ST1O14792 307 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GALR2O43603 387 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RPL35P42766 123 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GPR12P47775 334 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 RPS16P62249 146 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TESK1Q15569 626 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 TIGITQ495A1 244 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 DESI1Q6ICB0 168 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 BTNL8Q6UX41 500 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 Q6ZTK2 550 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 MEPCEQ7L2J0 689 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 GLB1L2Q8IW92 636 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 MFSD6LQ8IWD5 586 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 OR13C8Q8NGS7 320 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 MRPS24Q96EL2 167 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 NIPSNAP3BQ9BS92 247 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CHRDL1Q9BU40 450 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 KLK4Q9Y5K2 254 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ACOT8O14734 319 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 PHF1O43189 567 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 SNAP29O95721 258 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 CRYABP02511 175 aaKnown RBP5.16□□□□□ -1.58
SCN1A-209ENST00000635750 ACP2P11117 423 aa5.16□□□□□ -1.58
SCN1A-209ENST00000635750 G0S2P27469 103 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms