RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 MNAT1P51948 309 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 FOXG1P55316 489 aaPredicted RBP18.36■□□□□ 0.53
SF1-221ENST00000633899 ST3GAL3Q11203 375 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 GABRA6Q16445 453 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 HMBOX1Q6NT76 420 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 C16orf89Q6UX73 402 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 ZNF704Q6ZNC4 412 aaPredicted RBP18.36■□□□□ 0.53
SF1-221ENST00000633899 GPR137CQ8N3F9 429 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 RNF148Q8N7C7 305 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 PRRC1Q96M27 445 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 PRSS27Q9BQR3 290 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 ZNF426Q9BUY5 554 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 EGFL7Q9UHF1 273 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 NOX1Q9Y5S8 564 aa18.36■□□□□ 0.53
SF1-221ENST00000633899 CCDC168Q8NDH2 2452 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 MS4A18H0YCH9 400 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 CLOCKO15516 846 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 LOXP28300 417 aaPredicted RBP18.35■□□□□ 0.53
SF1-221ENST00000633899 MS4A18Q3C1V0 323 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 GLYATQ6IB77 296 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 NANOGNBQ7Z5D8 188 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 NKAIN4Q8IVV8 208 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 C17orf78Q8N4C9 275 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 TMEM255BQ8WV15 326 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 TMEM239Q8WW34 195 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 HSH2DQ96JZ2 352 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 HS6ST2Q96MM7 605 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 MUS81Q96NY9 551 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 LINC00470Q9BZP3 86 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 ZNF229Q9UJW7 825 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 RNF115Q9Y4L5 304 aa18.35■□□□□ 0.53
SF1-221ENST00000633899 A0A1W2PR80 420 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 C11orf98E9PRG8 122 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 PLPP3O14495 311 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 TRAF3IP2O43734 574 aaPredicted RBP18.34■□□□□ 0.53
SF1-221ENST00000633899 ATE1O95260 518 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 HPRP00739 348 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 MT-ND1P03886 318 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 TCN1P20061 433 aaPredicted RBP18.34■□□□□ 0.53
SF1-221ENST00000633899 YAP1P46937 504 aaKnown RBP18.34■□□□□ 0.53
SF1-221ENST00000633899 SLC25A3Q00325 362 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 LGALS3BPQ08380 585 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 KRT72Q14CN4 511 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 ACKR1Q16570 336 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 SAMD4BQ5PRF9 694 aaKnown RBP18.34■□□□□ 0.53
SF1-221ENST00000633899 NCMAPQ5T1S8 102 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 KLHL17Q6TDP4 642 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 C20orf204Q6ZNR8 217 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 PXKQ7Z7A4 578 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 PIK3C3Q8NEB9 887 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 FNDC11Q9BVV2 318 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 AMBRA1Q9C0C7 1298 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 AMDHD2Q9Y303 409 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 MED31Q9Y3C7 131 aa18.34■□□□□ 0.53
SF1-221ENST00000633899 DSCAMO60469 2012 aa18.33■□□□□ 0.53
SF1-221ENST00000633899 ZNF726A6NNF4 738 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 RNF13O43567 381 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 UPK3AO75631 287 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 ZNF432O94892 652 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 HLA-DOBP13765 273 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 UGT2B15P54855 530 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 BSPH1Q075Z2 132 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 CARD17Q5XLA6 110 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 CYP4Z1Q86W10 505 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 DEFB107AQ8IZN7 70 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 PFN4Q8NHR9 129 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 SGTBQ96EQ0 304 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 CDRT15Q96T59 188 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 ADAM21Q9UKJ8 722 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 A4GNTQ9UNA3 340 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 SAMD4AQ9UPU9 718 aaKnown RBP18.33■□□□□ 0.52
SF1-221ENST00000633899 MAGED1Q9Y5V3 778 aaPredicted RBP18.33■□□□□ 0.52
SF1-221ENST00000633899 SLC25A15Q9Y619 301 aa18.33■□□□□ 0.52
SF1-221ENST00000633899 RAI1Q7Z5J4 1906 aaPredicted RBP18.32■□□□□ 0.52
SF1-221ENST00000633899 WNT11O96014 354 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 PLAUP00749 431 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 SH3BGRP55822 239 aaPredicted RBP18.32■□□□□ 0.52
SF1-221ENST00000633899 PRPS1P60891 318 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 ROR2Q01974 943 aaKnown RBP18.32■□□□□ 0.52
SF1-221ENST00000633899 TMEM108Q6UXF1 575 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 FITM2Q8N6M3 262 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 LRRC17Q8N6Y2 441 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 FAM156AQ8NDB6 213 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 ANKK1Q8NFD2 765 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 OR2M2Q96R28 347 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 CCL19Q99731 98 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 FOXC2Q99958 501 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 B3GAT2Q9NPZ5 323 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 MEPEQ9NQ76 525 aaPredicted RBP18.32■□□□□ 0.52
SF1-221ENST00000633899 SLC17A5Q9NRA2 495 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 MED29Q9NX70 200 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 MAGEL2Q9UJ55 1249 aa18.32■□□□□ 0.52
SF1-221ENST00000633899 SLC35F4A4IF30 521 aa18.31■□□□□ 0.52
SF1-221ENST00000633899 BLOC1S5-TXNDC5H3BN57 136 aa18.31■□□□□ 0.52
SF1-221ENST00000633899 OR7A10O76100 309 aa18.31■□□□□ 0.52
SF1-221ENST00000633899 HSD17B1P14061 328 aa18.31■□□□□ 0.52
SF1-221ENST00000633899 FUT1P19526 365 aa18.31■□□□□ 0.52
SF1-221ENST00000633899 ZNF83P51522 516 aa18.31■□□□□ 0.52
SF1-221ENST00000633899 UBE2NP61088 152 aaKnown RBP18.31■□□□□ 0.52
SF1-221ENST00000633899 TRAM2Q15035 370 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms