RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SLITRK2Q9H156 845 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 RSPH9Q9H1X1 276 aaPredicted RBP12.91□□□□□ -0.34
LDB3-209ENST00000623056 ZNF768Q9H5H4 540 aaKnown RBP12.91□□□□□ -0.34
LDB3-209ENST00000623056 TMEM185BQ9H7F4 350 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 IL21RQ9HBE5 538 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 TAS2R8Q9NYW2 309 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 PLEKHM1Q9Y4G2 1056 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 IER3IP1Q9Y5U9 82 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 A0A0D9SG52 128 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 GXYLT2A0PJZ3 443 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 DISC1C4P0D8 188 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 F8W036 122 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 LINC01387J3KSC0 135 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 IMPA2O14732 288 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 CCL16O15467 120 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 C8AP07357 584 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 GTF2F2P13984 249 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 AK4P27144 223 aaPredicted RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 LUMP51884 338 aaPredicted RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 ST8SIA6P61647 398 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 GUCA2AQ02747 115 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 LY6G6FQ5SQ64 297 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 TMPRSS12Q86WS5 348 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 PUSL1Q8N0Z8 303 aaKnown RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 MRPL48Q96GC5 212 aaKnown RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 TSNAXQ99598 290 aaKnown RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 EXO5Q9H790 373 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 FLRT3Q9NZU0 649 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 ZNF230Q9UIE0 474 aaPredicted RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 A0A0B4J2E0 115 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 A0A1B0GX12 115 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 PCCBP05166 539 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 ITGB8P26012 769 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 TSFMP43897 325 aaKnown RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 SOX2P48431 317 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 RAB13P51153 203 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 CCDC157Q569K6 752 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 JMJD6Q6NYC1 403 aaPredicted RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 HAGHLQ6PII5 290 aaPredicted RBP12.9□□□□□ -0.34
LDB3-209ENST00000623056 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 MTSS1LQ765P7 747 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 RAB11FIP2Q7L804 512 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 OR2W3Q7Z3T1 314 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 LRRTM1Q86UE6 522 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 LDLRAD3Q86YD5 345 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 KCNRGQ8N5I3 272 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 OR6K6Q8NGW6 343 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 ZNF75AQ96N20 296 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 PRDM9Q9NQV7 894 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 C14orf105Q9NVL8 296 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 TBX21Q9UL17 535 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 ZNF337Q9Y3M9 751 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 ADAM18Q9Y3Q7 739 aa12.9□□□□□ -0.34
LDB3-209ENST00000623056 A0A1B0GVT2 93 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 A0A1B0GWA3 101 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 KANTRA0A1W2PQU2 76 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 MCIDASD6RGH6 385 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 AKAIN1P0CW23 69 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 AGTR1P30556 359 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 GPR85P60893 370 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 SNRPNP63162 240 aaKnown RBP12.89□□□□□ -0.35
LDB3-209ENST00000623056 DEFB103AP81534 67 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 CDK3Q00526 305 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 SERTAD2Q14140 314 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 TEAD2Q15562 447 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 FIGNL1Q6PIW4 674 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 CCDC36Q8IYA8 594 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 OR2L8Q8NGY9 312 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 ZPLD1Q8TCW7 415 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 ASB12Q8WXK4 309 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 LRFN5Q96NI6 719 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 PTCHD1Q96NR3 888 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 NMNAT3Q96T66 252 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 GGT3PA6NGU5 568 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 RPP14O95059 124 aaKnown RBP12.89□□□□□ -0.35
LDB3-209ENST00000623056 NDUFB2O95178 105 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 SPI1P17947 270 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 PPIAP62937 165 aaKnown RBP12.89□□□□□ -0.35
LDB3-209ENST00000623056 UBE2IP63279 158 aaKnown RBP12.89□□□□□ -0.35
LDB3-209ENST00000623056 Q499Y3 187 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 TMEM52BQ4KMG9 183 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 UQCC3Q6UW78 93 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 CBLN2Q8IUK8 224 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
LDB3-209ENST00000623056 COX18Q8N8Q8 333 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 OR2L3Q8NG85 312 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 OR8K3Q8NH51 312 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 PIGMQ9H3S5 423 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 TRPV4Q9HBA0 871 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
LDB3-209ENST00000623056 CYB5R1Q9UHQ9 305 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms