RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 NTRK2Q16620 822 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 ZNF684Q5T5D7 378 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 MARCH3Q86UD3 253 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 OR1L3Q8NH93 324 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 LGALS14Q8TCE9 139 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 RGP1Q92546 391 aaPredicted RBP10.89□□□□□ -0.67
TP53-227ENST00000622645 YIPF5Q969M3 257 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 GFI1Q99684 422 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 ABRACLQ9P1F3 81 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 GRHPRQ9UBQ7 328 aa10.89□□□□□ -0.67
TP53-227ENST00000622645 EML5Q05BV3 1969 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 RP1P56715 2156 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ANKRD34BA5PLL1 514 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 FRG2CA6NGY1 282 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ZNF24P17028 368 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ITPKBP27987 946 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 UQCRC1P31930 480 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 EVI2BP34910 448 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 NR0B1P51843 470 aaKnown RBP10.88□□□□□ -0.67
TP53-227ENST00000622645 HSD11B2P80365 405 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 EFR3AQ14156 821 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 NSDHLQ15738 373 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 HES5Q5TA89 166 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 BCL2L15Q5TBC7 163 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 C1orf189Q5VU69 101 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 OTPQ5XKR4 325 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 OGFOD3Q6PK18 319 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 UNQ9370/PRO34162Q6UXP9 181 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 OVCH1Q7RTY7 1134 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 TCTE3Q8IZS6 198 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ZNF433Q8N7K0 673 aaPredicted RBP10.88□□□□□ -0.67
TP53-227ENST00000622645 EXD3Q8N9H8 876 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 CEP76Q8TAP6 659 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 LIPHQ8WWY8 451 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 PHF7Q9BWX1 381 aaPredicted RBP10.88□□□□□ -0.67
TP53-227ENST00000622645 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.88□□□□□ -0.67
TP53-227ENST00000622645 EXOSC3Q9NQT5 275 aaKnown RBP10.88□□□□□ -0.67
TP53-227ENST00000622645 NUDT15Q9NV35 164 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ANKRD10Q9NXR5 420 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ZNF281Q9Y2X9 895 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 UNC13CQ8NB66 2214 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 A0A1B0GTH9 108 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ANKRD61A6NGH8 418 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 UBL3O95164 117 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 GPANK1O95872 356 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 FOLR1P15328 257 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 CLDN12P56749 244 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 NXPH1P58417 271 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 MESTQ5EB52 335 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 NANOGNBQ7Z5D8 188 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 SIAH3Q8IW03 269 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 C9orf40Q8IXQ3 194 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 OR6V1Q8N148 313 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 TOMM5Q8N4H5 51 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 ADAD1Q96M93 576 aaKnown RBP10.88□□□□□ -0.67
TP53-227ENST00000622645 TSPAN32Q96QS1 320 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 CCNL2Q96S94 520 aaPredicted RBP10.88□□□□□ -0.67
TP53-227ENST00000622645 TEKT2Q9UIF3 430 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 SPATA2Q9UM82 520 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 MMACHCQ9Y4U1 282 aa10.88□□□□□ -0.67
TP53-227ENST00000622645 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 A0A0A6YYJ9 748 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 ZNF879B4DU55 563 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 GPRIN2O60269 458 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 NUDT14O95848 222 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 HSF2Q03933 536 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 BIKQ13323 160 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 EBPQ15125 230 aaKnown RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 LIPNQ5VXI9 398 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 SLC16A9Q7RTY1 509 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 HAVCR2Q8TDQ0 301 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 OR1F2PQ96R84 312 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 NDEL1Q9GZM8 345 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 CHRNA10Q9GZZ6 450 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 MRM2Q9UI43 246 aaKnown RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 CABIN1Q9Y6J0 2220 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 IGHV1OR21-1A0A087WYE8 117 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 H3BSH0 61 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 CD1AP06126 327 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 APEHP13798 732 aaKnown RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 GIFP27352 417 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 IL12BP29460 328 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 SLC25A1P53007 311 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 FAPQ12884 760 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 ELAVL1Q15717 326 aaKnown RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 SHISA6Q6ZSJ9 500 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 SLC35F3Q8IY50 421 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 TIGD4Q8IY51 512 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 CMTM4Q8IZR5 234 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 GCDHQ92947 438 aaPredicted RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 MRPL48Q96GC5 212 aaKnown RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 ADAM19Q9H013 955 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 RAB33BQ9H082 229 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 SYT4Q9H2B2 425 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 TTYH1Q9H313 450 aaPredicted RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 WDR76Q9H967 626 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 ING3Q9NXR8 418 aa10.87□□□□□ -0.67
TP53-227ENST00000622645 ING1Q9UK53 422 aaPredicted RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 PCDHGA9Q9Y5G4 932 aaKnown RBP10.87□□□□□ -0.67
TP53-227ENST00000622645 TCRBV16S1A1N1A0A5B0 115 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms