RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TEX12Q9BXU0 123 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 SRXN1Q9BYN0 137 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 ANKRD60Q9BZ19 345 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 NDEL1Q9GZM8 345 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 NRIP3Q9NQ35 241 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 INIPQ9NRY2 104 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 TBC1D23Q9NUY8 699 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 TVP23BQ9NYZ1 205 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 SEC14L4Q9UDX3 406 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 IL20RAQ9UHF4 553 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 RASD1Q9Y272 281 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 IER3IP1Q9Y5U9 82 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 HSPE1-MOB4S4R3N1 261 aa7.18□□□□□ -1.26
CPNE3-209ENST00000620393 TPRP12270 2363 aaKnown RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 A0A1W2PNV4 684 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 AHRRA9YTQ3 701 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF814B7Z6K7 855 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 MCIDASD6RGH6 385 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 NPIPA2E9PIF3 369 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 C11orf98E9PRG8 122 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 NPIPA3F8WFD2 350 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CLIC3O95833 236 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 TXNDC12O95881 172 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 F13BP05160 661 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 GNAO1P09471 354 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 MYF6P23409 242 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 GRK5P34947 590 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CDC42P60953 191 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ERVK-25P63136 954 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 PUDPQ08623 228 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 MED21Q13503 144 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 LY6DQ14210 128 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 SNAPC1Q16533 368 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ST3GAL2Q16842 350 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 PGGHGQ32M88 737 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF362Q5T0B9 420 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF691Q5VV52 312 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 GPR139Q6DWJ6 353 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 PCSK4Q6UW60 755 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CASP12Q6UXS9 341 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CHMP1BQ7LBR1 199 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 THAP5Q7Z6K1 395 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CCDC71Q8IV32 467 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CHERPQ8IWX8 916 aaKnown RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 PM20D2Q8IYS1 436 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 DEPDC4Q8N2C3 294 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 GHDCQ8N2G8 530 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 SETD9Q8NE22 299 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 RHOXF1Q8NHV9 184 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZPLD1Q8TCW7 415 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ROBO4Q8WZ75 1007 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CPNE4Q96A23 557 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF845Q96IR2 970 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ERMAPQ96PL5 475 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 SLC38A2Q96QD8 506 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 UCN2Q96RP3 112 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 KATNB1Q9BVA0 655 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 SF3B5Q9BWJ5 86 aaKnown RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 PRDM14Q9GZV8 571 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF226Q9NYT6 803 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 B3GAT1Q9P2W7 334 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 TNFRSF10DQ9UBN6 386 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF346Q9UL40 294 aaKnown RBP7.17□□□□□ -1.26
CPNE3-209ENST00000620393 CAMK2AQ9UQM7 478 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 NOX1Q9Y5S8 564 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 EML6Q6ZMW3 1958 aa7.17□□□□□ -1.26
CPNE3-209ENST00000620393 IGHV3-15A0A0B4J1V0 119 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 A0A1W2PRG6 482 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 NPIPB13A6NJU9 1138 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 TTLL8A6PVC2 850 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 NPIPB4C9JG80 1138 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SMAD9O15198 467 aaKnown RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SURF4O15260 269 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 TLX2O43763 284 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 MPZL2O60487 215 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 CYTIPO60759 359 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 RAMP1O60894 148 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SYNGR4O95473 234 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 PPP1R3DO95685 299 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 BCL10O95999 233 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 HLA-DOBP13765 273 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF43P17038 809 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 KLK2P20151 261 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 NOS3P29474 1203 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 PTGS2P35354 604 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 PCYT1AP49585 367 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 TDGF1P3P51864 188 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 RPL27P61353 136 aaKnown RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SNRPGP62308 76 aaKnown RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 HSF1Q00613 529 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 IL5RAQ01344 420 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 C1DQ13901 141 aaKnown RBP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SLC17A1Q14916 467 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 PDK3Q15120 406 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 POU4F3Q15319 338 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 SF3B4Q15427 424 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPNE3-209ENST00000620393 ACKR1Q16570 336 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 C3AR1Q16581 482 aa7.16□□□□□ -1.26
CPNE3-209ENST00000620393 EMC4Q5J8M3 183 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms