RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 ASAH1Q13510 395 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 SYT14P1Q58G82 188 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 LAIR1Q6GTX8 287 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 OVCH1Q7RTY7 1134 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 ZNF683Q8IZ20 524 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 C12orf45Q8N5I9 185 aaPredicted RBP13.6□□□□□ -0.23
SNPH-203ENST00000614659 FAM83FQ8NEG4 500 aaPredicted RBP13.6□□□□□ -0.23
SNPH-203ENST00000614659 MVB12AQ96EY5 273 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 PIGQQ9BRB3 760 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 ZNF442Q9H7R0 627 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 OSGIN1Q9UJX0 560 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 WIF1Q9Y5W5 379 aa13.6□□□□□ -0.23
SNPH-203ENST00000614659 TSPAN11A1L157 253 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MKRN2OSH3BPM6 223 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 SLC16A7O60669 478 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 RRAS2P62070 204 aaPredicted RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 TMEM185AQ8NFB2 350 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 ADOQ96SZ5 270 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 OR52A5Q9H2C5 316 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 ELOVL3Q9HB03 270 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 QPCTLQ9NXS2 382 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 YARS2Q9Y2Z4 477 aaKnown RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 SCN4AP35499 1836 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 TBX19O60806 448 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 TRIM23P36406 574 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 EPHA5P54756 1037 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 PAPD4Q6PIY7 484 aaKnown RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 CFAP77Q6ZQR2 320 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 PTOV1Q86YD1 416 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 TMEM255BQ8WV15 326 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 LCORQ96JN0 433 aaPredicted RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 SLC41A2Q96JW4 573 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 UBQLN3Q9H347 655 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 TMEM202A6NGA9 273 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MT-ATP6P00846 226 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MT-ND4P03905 459 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 OR8U9P0C7N5 309 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 CYB561P49447 251 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 NKX6-1P78426 367 aaPredicted RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 SGPP2Q8IWX5 399 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MMP21Q8N119 569 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 LMNTD1Q8N9Z9 388 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 DTWD2Q8NBA8 298 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 NAXEQ8NCW5 288 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 DYNC2LI1Q8TCX1 351 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 TNFRSF13CQ96RJ3 184 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MFFQ9GZY8 342 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 CORINQ9Y5Q5 1042 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 CRTAPO75718 401 aaPredicted RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 P2RY14Q15391 338 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 LILRA3Q8N6C8 439 aaPredicted RBP13.59□□□□□ -0.23
SNPH-203ENST00000614659 SLC37A2Q8TED4 501 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MUTYHQ9UIF7 546 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 ICKQ9UPZ9 632 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 COL4A1P02462 1669 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 GYPBP06028 91 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 SFTPDP35247 375 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 CCL11P51671 97 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 IL20RBQ6UXL0 311 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 SHISA6Q6ZSJ9 500 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 FRMD1Q8N878 549 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 DCUN1D4Q92564 292 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 GHSRQ92847 366 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 RAB39BQ96DA2 213 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 MAN2C1Q9NTJ4 1040 aa13.59□□□□□ -0.23
SNPH-203ENST00000614659 SSX4O60224 188 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 GLSO94925 669 aaPredicted RBP13.58□□□□□ -0.24
SNPH-203ENST00000614659 TGM6O95932 706 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 TMEM225BP0DP42 221 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 DUSP8Q13202 625 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 PPA1Q15181 289 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 FCRL1Q96LA6 429 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 MED18Q9BUE0 208 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 SLC6A17Q9H1V8 727 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 UBE2J1Q9Y385 318 aaPredicted RBP13.58□□□□□ -0.24
SNPH-203ENST00000614659 IGLV3-16A0A075B6K0 115 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 HSPB2A8KAH6 182 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 SNAPINO95295 136 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 PSMB1P20618 241 aaKnown RBP13.58□□□□□ -0.24
SNPH-203ENST00000614659 HOXC8P31273 242 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 HSPB2Q16082 182 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 ZNF674Q2M3X9 581 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 ZNF385BQ569K4 471 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 FAM111BQ6SJ93 734 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 DND1Q8IYX4 353 aaKnown RBP13.58□□□□□ -0.24
SNPH-203ENST00000614659 WBP2Q969T9 261 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 HCAR1Q9BXC0 346 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 KCNIP1Q9NZI2 227 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 GHRLQ9UBU3 117 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 ARFGEF1Q9Y6D6 1849 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 A0A0D9SG52 128 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 ZNF749O43361 778 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 GLCEO94923 617 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 DDAH2O95865 285 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 POU3F4P49335 361 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 SLC26A5P58743 744 aa13.58□□□□□ -0.24
SNPH-203ENST00000614659 C17orf67Q0P5P2 114 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms