RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RBM4Q9BWF3 364 aaKnown RBP19.26■□□□□ 0.67
CBWD3-207ENST00000611426 AMBRA1Q9C0C7 1298 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 CXorf56Q9H5V9 222 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 EVA1AQ9H8M9 152 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 REEP1Q9H902 201 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 NGBQ9NPG2 151 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 ACER3Q9NUN7 267 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 ING1Q9UK53 422 aaPredicted RBP19.26■□□□□ 0.67
CBWD3-207ENST00000611426 WDR45Q9Y484 360 aa19.26■□□□□ 0.67
CBWD3-207ENST00000611426 TRIM64A6NGJ6 449 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 TRIM64BA6NI03 449 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 AGAP5A6NIR3 686 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF814B7Z6K7 855 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 CYTIPO60759 359 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 TAB1Q15750 504 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 TBPL2Q6SJ96 375 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 TMEM179BQ7Z7N9 219 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF619Q8N2I2 560 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF775Q96BV0 537 aaPredicted RBP19.25■□□□□ 0.67
CBWD3-207ENST00000611426 NR1H4Q96RI1 486 aaPredicted RBP19.25■□□□□ 0.67
CBWD3-207ENST00000611426 USB1Q9BQ65 265 aaKnown RBP19.25■□□□□ 0.67
CBWD3-207ENST00000611426 ESRP2Q9H6T0 727 aaKnown RBP19.25■□□□□ 0.67
CBWD3-207ENST00000611426 SMPD3Q9NY59 655 aaPredicted RBP19.25■□□□□ 0.67
CBWD3-207ENST00000611426 SLC35A3Q9Y2D2 325 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 SLC9A8Q9Y2E8 581 aa19.25■□□□□ 0.67
CBWD3-207ENST00000611426 SMAD9O15198 467 aaKnown RBP19.24■□□□□ 0.67
CBWD3-207ENST00000611426 TMCC2O75069 709 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 E2F6O75461 281 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 PAX1P15863 534 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 OR3A2P47893 321 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 LIMS1P48059 325 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 DIO1P49895 249 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 EPS8Q12929 822 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 RFX4Q33E94 735 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 TMPPEQ6ZT21 453 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 Q6ZT83 130 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 CARM1Q86X55 608 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 OR4C15Q8NGM1 316 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF563Q8TA94 476 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 TFAP2CQ92754 450 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 ARHGDIGQ99819 225 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 PRSS50Q9UI38 385 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 SH3GLB1Q9Y371 365 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 SAMHD1Q9Y3Z3 626 aaKnown RBP19.24■□□□□ 0.67
CBWD3-207ENST00000611426 RNF115Q9Y4L5 304 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 LYVE1Q9Y5Y7 322 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 USF3Q68DE3 2245 aa19.24■□□□□ 0.67
CBWD3-207ENST00000611426 ARRDC5A6NEK1 342 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 SULT2B1O00204 365 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 CD3EP07766 207 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 TNFRSF1BP20333 461 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 APOBEC1P41238 236 aaKnown RBP19.23■□□□□ 0.67
CBWD3-207ENST00000611426 OR1E2P47887 323 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 ARHGDIAP52565 204 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 CSNK2A1P68400 391 aaPredicted RBP19.23■□□□□ 0.67
CBWD3-207ENST00000611426 MED21Q13503 144 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 SYT14P1Q58G82 188 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 NCMAPQ5T1S8 102 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 SWT1Q5T5J6 900 aaKnown RBP19.23■□□□□ 0.67
CBWD3-207ENST00000611426 BHLHA15Q7RTS1 189 aaPredicted RBP19.23■□□□□ 0.67
CBWD3-207ENST00000611426 PEX5LQ8IYB4 626 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 ZG16BQ96DA0 208 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF701Q9NV72 531 aaPredicted RBP19.23■□□□□ 0.67
CBWD3-207ENST00000611426 LAMP3Q9UQV4 416 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 FAM32AQ9Y421 112 aaKnown RBP19.23■□□□□ 0.67
CBWD3-207ENST00000611426 ZANQ9Y493 2812 aa19.23■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF724A8MTY0 619 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 H0YAE9 185 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 CNOT4O95628 575 aaKnown RBP19.22■□□□□ 0.67
CBWD3-207ENST00000611426 DBIP07108 87 aaKnown RBP19.22■□□□□ 0.67
CBWD3-207ENST00000611426 TFPIP10646 304 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 RYKP34925 604 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 ATP5J2P56134 94 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 RNF220Q5VTB9 566 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 ADAM5Q6NVV9 412 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 FAHD1Q6P587 224 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 COMTD1Q86VU5 262 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 FAM71CQ8NEG0 241 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 OR52P1PQ8NH57 321 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 SLC25A43Q8WUT9 341 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-207ENST00000611426 POTEKPQ9BYX7 375 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 ANKRD60Q9BZ19 345 aa19.22■□□□□ 0.67
CBWD3-207ENST00000611426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-207ENST00000611426 SPIN1Q9Y657 262 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-207ENST00000611426 BCAS1O75363 584 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 LYZL6O75951 148 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 RRM2P31350 389 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 LARS2Q15031 903 aaKnown RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ZSWIM7Q19AV6 140 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF311Q5JNZ3 666 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 GALNT5Q7Z7M9 940 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 HMGN2P46Q86SG4 172 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 CYP4Z1Q86W10 505 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF100Q8IYN0 542 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 LILRB1Q8NHL6 650 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ADI1Q9BV57 179 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 CACYBPQ9HB71 228 aaKnown RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 CTPS2Q9NRF8 586 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ZNF232Q9UNY5 417 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms