RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PCDHAC1Q9H158 963 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 ARL2BPQ9Y2Y0 163 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 SLC25A15Q9Y619 301 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 M0R1B8 84 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 HS3ST1O14792 307 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 FZD7O75084 574 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 OR6A2O95222 327 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 ADORA3P0DMS8 318 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 NCK1P16333 377 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 YAP1P46937 504 aaKnown RBP12.65□□□□□ -0.38
TUBE1-208ENST00000604743 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-208ENST00000604743 PUDPQ08623 228 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 ZNF74Q16587 644 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 HIKESHIQ53FT3 197 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 HMBOX1Q6NT76 420 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 LINGO2Q7L985 606 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 PIGWQ7Z7B1 504 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 VTCN1Q7Z7D3 282 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 LRRC17Q8N6Y2 441 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 SCAIQ8N9R8 606 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 WDR31Q8NA23 367 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 ADPRHL1Q8NDY3 354 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 OR5J2Q8NH18 312 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 TMEM255BQ8WV15 326 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 PIGTQ969N2 578 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 FAM162AQ96A26 154 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 CXXC4Q9H2H0 198 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 NANSQ9NR45 359 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 BEX4Q9NWD9 120 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-208ENST00000604743 MED29Q9NX70 200 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 MRPL39Q9NYK5 338 aaKnown RBP12.65□□□□□ -0.38
TUBE1-208ENST00000604743 ADA2Q9NZK5 511 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 RIMS3Q9UJD0 308 aa12.65□□□□□ -0.38
TUBE1-208ENST00000604743 USF3Q68DE3 2245 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 PLPP3O14495 311 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 ABCD4O14678 606 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-208ENST00000604743 AKAP8O43823 692 aaKnown RBP12.64□□□□□ -0.39
TUBE1-208ENST00000604743 SMPD2O60906 423 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF432O94892 652 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 OR5F1O95221 314 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 MT-ATP6P00846 226 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 SERPINA1P01009 418 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 HIST1H2ABP04908 130 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 SLC25A3Q00325 362 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
TUBE1-208ENST00000604743 KLHL17Q6TDP4 642 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 KLHL24Q6TFL4 600 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 FKBP9P1Q75LS8 142 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 HIST3H2AQ7L7L0 130 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 GPR137CQ8N3F9 429 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 RNF148Q8N7C7 305 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-208ENST00000604743 OR1K1Q8NGR3 316 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 LILRB1Q8NHL6 650 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-208ENST00000604743 PFN4Q8NHR9 129 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 HIST1H2ACQ93077 130 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 LRRC37BQ96QE4 947 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 AMBRA1Q9C0C7 1298 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 ARL8BQ9NVJ2 186 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 EGFL7Q9UHF1 273 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 RCE1Q9Y256 329 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 AMDHD2Q9Y303 409 aa12.64□□□□□ -0.39
TUBE1-208ENST00000604743 A0A096LPE4 126 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 A0A1W2PPZ6 126 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 SLC35F4A4IF30 521 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF726A6NNF4 738 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 M0R3G1 203 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 DCTN3O75935 186 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 WNT11O96014 354 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 UGT2B15P54855 530 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 PRPS1P60891 318 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TUBA1BP68363 451 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TUBA4AP68366 448 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 NKX6-1P78426 367 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-208ENST00000604743 CAMK2DQ13557 499 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TBRG1Q3YBR2 411 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TMEM108Q6UXF1 575 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TUBA1AQ71U36 451 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 CBLL1Q75N03 491 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 SSX8Q7RTT4 187 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 C17orf78Q8N4C9 275 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF611Q8N823 705 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 PIK3C3Q8NEB9 887 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 TMEM239Q8WW34 195 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 FBXW5Q969U6 566 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 PERPQ96FX8 193 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 HSH2DQ96JZ2 352 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 OR2M2Q96R28 347 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 SLC19A3Q9BZV2 496 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms