RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 HOXD4P09016 255 aaPredicted RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 RPL4P36578 427 aaKnown RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 RAD23AP54725 363 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 RASGEF1BQ0VAM2 473 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 MRPL49Q13405 166 aaKnown RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 SLC17A1Q14916 467 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 CLEC12AQ5QGZ9 265 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 PXKQ7Z7A4 578 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 RPRMLQ8N4K4 120 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 SF3B5Q9BWJ5 86 aaKnown RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 VCX3BQ9H321 246 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 INIPQ9NRY2 104 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 TBC1D23Q9NUY8 699 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 LOC102725191A0A1B0GVB3 256 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 ZNF716A6NP11 495 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 SNAP29O95721 258 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 ESRRGP62508 458 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 POU3F1Q03052 451 aaPredicted RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 ZIK1Q3SY52 487 aaPredicted RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 UEVLDQ8IX04 471 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 ANKK1Q8NFD2 765 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 OR52L1Q8NGH7 329 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 TEX47Q8TBZ9 253 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 WNT2BQ93097 391 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 TSSK6Q9BXA6 273 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 NDEL1Q9GZM8 345 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 RASSF4Q9H2L5 321 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 RIBC2Q9H4K1 309 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 RNF122Q9H9V4 155 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 SMPD3Q9NY59 655 aaPredicted RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 KLHL9Q9P2J3 617 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 ENOPH1Q9UHY7 261 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 RALYQ9UKM9 306 aaKnown RBP18.23■□□□□ 0.51
PNKP-215ENST00000600910 NOX1Q9Y5S8 564 aa18.23■□□□□ 0.51
PNKP-215ENST00000600910 EIF4E1BA6NMX2 242 aaKnown RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 DLGAP1O14490 977 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 ZNF43P17038 809 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 CDH2P19022 906 aaPredicted RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 EPHA2P29317 976 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 SLC6A6P31641 620 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 POLR2IP36954 125 aaKnown RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 CRISP1P54107 249 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 CTXN1P60606 82 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 NPRL3Q12980 569 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 C1DQ13901 141 aaKnown RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 RNPS1Q15287 305 aaKnown RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 POU4F3Q15319 338 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 GTF2IRD2BQ6EKJ0 949 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 B3GNT6Q6ZMB0 384 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 SEM1Q6ZVN7 128 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 GTF2IRD2Q86UP8 949 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 MCEMP1Q8IX19 187 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 C9orf106Q8NAJ2 232 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 OR9K2Q8NGE7 335 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 GPX7Q96SL4 187 aaPredicted RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 KATNB1Q9BVA0 655 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 GABARAPL3Q9BY60 117 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 TOR3AQ9H497 397 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 ING1Q9UK53 422 aaPredicted RBP18.22■□□□□ 0.51
PNKP-215ENST00000600910 OSGIN2Q9Y236 505 aa18.22■□□□□ 0.51
PNKP-215ENST00000600910 TRGV8A0A0C4DH27 118 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 MBD3L4A6NDZ8 208 aaPredicted RBP18.21■□□□□ 0.51
PNKP-215ENST00000600910 MBD3L3A6NE82 208 aaPredicted RBP18.21■□□□□ 0.51
PNKP-215ENST00000600910 MBD3L5A6NJ08 208 aaPredicted RBP18.21■□□□□ 0.51
PNKP-215ENST00000600910 VHLP40337 213 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 SLC16A1P53985 500 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 IGFBP7Q16270 282 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 DPY19L2P2Q6ZN68 376 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 CREB3L2Q70SY1 520 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 MBD3L2Q8NHZ7 208 aaPredicted RBP18.21■□□□□ 0.51
PNKP-215ENST00000600910 ZNF775Q96BV0 537 aaPredicted RBP18.21■□□□□ 0.51
PNKP-215ENST00000600910 RDH12Q96NR8 316 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 IFT27Q9BW83 186 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 POLDIP3Q9BY77 421 aaKnown RBP18.21■□□□□ 0.51
PNKP-215ENST00000600910 NRIP3Q9NQ35 241 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 CLEC4AQ9UMR7 237 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 ADAM18Q9Y3Q7 739 aa18.21■□□□□ 0.51
PNKP-215ENST00000600910 A0A1W2PRG6 482 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 TRAF3IP2O43734 574 aaPredicted RBP18.2■□□□□ 0.5
PNKP-215ENST00000600910 PPP1R3DO95685 299 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 CD14P08571 375 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 IFNGR1P15260 489 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 CASP6P55212 293 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 ERVK-25P63136 954 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 PDK3Q15120 406 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 PTGES3Q15185 160 aaKnown RBP18.2■□□□□ 0.5
PNKP-215ENST00000600910 EEF1A1P5Q5VTE0 462 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 NHLRC1Q6VVB1 395 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 IQCF1Q8N6M8 205 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 GALNT11Q8NCW6 608 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 ZNF570Q96NI8 536 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 MBOAT4Q96T53 435 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 TM9SF2Q99805 663 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 TTYH2Q9BSA4 534 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 MED29Q9NX70 200 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 FLVCR1Q9Y5Y0 555 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 RP1L1Q8IWN7 2480 aaPredicted RBP18.2■□□□□ 0.5
PNKP-215ENST00000600910 IGKV3D-15A0A087WSY6 115 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 BHLHE40O14503 412 aa18.2■□□□□ 0.5
PNKP-215ENST00000600910 CA7P43166 264 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms