RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 MT-ND1P03886 318 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 RAF1P04049 648 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 HSD17B1P14061 328 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 DNASE1P24855 282 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 MNAT1P51948 309 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 UGT2B15P54855 530 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 TGFBR3Q03167 851 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 LGALS3BPQ08380 585 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 TESK1Q15569 626 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 IFI44LQ53G44 452 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 NCMAPQ5T1S8 102 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 FKBP9P1Q75LS8 142 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 PXKQ7Z7A4 578 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 UEVLDQ8IX04 471 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 LRRC17Q8N6Y2 441 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 FAM156AQ8NDB6 213 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 C1orf162Q8NEQ5 155 aaPredicted RBP14.7□□□□□ -0.06
SSBP4-204ENST00000597724 TMEM239Q8WW34 195 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 GEMIN6Q8WXD5 167 aaKnown RBP14.7□□□□□ -0.06
SSBP4-204ENST00000597724 FAM162AQ96A26 154 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 HSH2DQ96JZ2 352 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 PRRC1Q96M27 445 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 HS6ST2Q96MM7 605 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 CDRT15Q96T59 188 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 ESRP2Q9H6T0 727 aaKnown RBP14.7□□□□□ -0.06
SSBP4-204ENST00000597724 NANSQ9NR45 359 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 CCM2LQ9NUG4 571 aaPredicted RBP14.7□□□□□ -0.06
SSBP4-204ENST00000597724 CD300AQ9UGN4 299 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 ZNF229Q9UJW7 825 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 NOX1Q9Y5S8 564 aa14.7□□□□□ -0.06
SSBP4-204ENST00000597724 ZNF587BE7ETH6 402 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 SLC43A1O75387 559 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 UPK3AO75631 287 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 ATE1O95260 518 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 PLAUP00749 431 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 ASAH2BP0C7U1 165 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 ADORA3P0DMS8 318 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 AHCYP23526 432 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 IFNA8P32881 189 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 POU3F1Q03052 451 aaPredicted RBP14.69□□□□□ -0.06
SSBP4-204ENST00000597724 ST3GAL3Q11203 375 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 KEAP1Q14145 624 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 FXNQ16595 210 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 SAMD4BQ5PRF9 694 aaKnown RBP14.69□□□□□ -0.06
SSBP4-204ENST00000597724 C16orf89Q6UX73 402 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 LINGO2Q7L985 606 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 SLC46A3Q7Z3Q1 461 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 TMEM123Q8N131 208 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 C17orf78Q8N4C9 275 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 OR52N5Q8NH56 324 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 BOD1Q96IK1 185 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 NSL1Q96IY1 281 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 OR2M2Q96R28 347 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 SLC17A5Q9NRA2 495 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 DCAF13Q9NV06 445 aaKnown RBP14.69□□□□□ -0.06
SSBP4-204ENST00000597724 NDE1Q9NXR1 346 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 TAS2R5Q9NYW4 299 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 RPS6KA6Q9UK32 745 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 SLC25A15Q9Y619 301 aa14.69□□□□□ -0.06
SSBP4-204ENST00000597724 CADP27708 2225 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 DPRXA6NFQ7 191 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 RPL36A-HNRNPH2H7BZ11 118 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 J3KTA2 159 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 FFAR1O14842 300 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 AKAP8O43823 692 aaKnown RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 GMNNO75496 209 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 CD53P19397 219 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 TCN1P20061 433 aaPredicted RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 FUT4P22083 530 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 YAP1P46937 504 aaKnown RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 ZP4Q12836 540 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 FOXD4Q12950 439 aaPredicted RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 ACKR1Q16570 336 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 ZNF704Q6ZNC4 412 aaPredicted RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 TSEN54Q7Z6J9 526 aaKnown RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 DEFB107AQ8IZN7 70 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 OFCC1Q8IZS5 231 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 WDR31Q8NA23 367 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 PIK3C3Q8NEB9 887 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 ANKK1Q8NFD2 765 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 PFN4Q8NHR9 129 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 MBD6Q96DN6 1003 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 TXNDC15Q96J42 360 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 ALKBH3Q96Q83 286 aaPredicted RBP14.68□□□□□ -0.06
SSBP4-204ENST00000597724 EMC6Q9BV81 110 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 GORASP2Q9H8Y8 452 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 C20orf141Q9NUB4 165 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 MED29Q9NX70 200 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 NPAP1Q9NZP6 1156 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 MED31Q9Y3C7 131 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 ITPR3Q14573 2671 aa14.68□□□□□ -0.06
SSBP4-204ENST00000597724 HIVEP1P15822 2718 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 RAI1Q7Z5J4 1906 aaPredicted RBP14.67□□□□□ -0.06
SSBP4-204ENST00000597724 A0A1W2PR80 420 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 SLC35F4A4IF30 521 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 C11orf98E9PRG8 122 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 PRSS23O95084 383 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 OR6A2O95222 327 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 HIST1H2ABP04908 130 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 UMPSP11172 480 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms