RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 MBOAT2Q6ZWT7 520 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 RRM2BQ7LG56 351 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 SLC46A3Q7Z3Q1 461 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 ZNF610Q8N9Z0 462 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 OR5J2Q8NH18 312 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 NR1H4Q96RI1 486 aaPredicted RBP17.15■□□□□ 0.34
PNKP-207ENST00000596014 OPN3Q9H1Y3 402 aaPredicted RBP17.15■□□□□ 0.34
PNKP-207ENST00000596014 B3GAT1Q9P2W7 334 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 HECTD1Q9ULT8 2610 aa17.14■□□□□ 0.34
PNKP-207ENST00000596014 LOC102725191A0A1B0GVB3 256 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 HNRNPRO43390 633 aaKnown RBP17.14■□□□□ 0.33
PNKP-207ENST00000596014 PRKCDQ05655 676 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 POU4F3Q15319 338 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 LIPHQ8WWY8 451 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 BPIFA2Q96DR5 249 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 OXGR1Q96P68 337 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 FUZQ9BT04 418 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 CHID1Q9BWS9 393 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 SEMA6AQ9H2E6 1030 aa17.14■□□□□ 0.33
PNKP-207ENST00000596014 NOSIPQ9Y314 301 aaKnown RBP17.14■□□□□ 0.33
PNKP-207ENST00000596014 PRSS44E7EML9 344 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 PLPP3O14495 311 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 OR7A10O76100 309 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 HPRP00739 348 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 HIST1H2ABP04908 130 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 HOXB6P17509 224 aaKnown RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 HSPA13P48723 471 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 SEC23BQ15437 767 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 CREB3L2Q70SY1 520 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 HIST3H2AQ7L7L0 130 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 EPHX4Q8IUS5 362 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 ZIC4Q8N9L1 334 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 HIST1H2ACQ93077 130 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 EME1Q96AY2 570 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 ALPK1Q96QP1 1244 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 C19orf84I3L1E1 186 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 FCGR1AP12314 374 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 GRNP28799 593 aaKnown RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 HMGA2P52926 109 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 PUDPQ08623 228 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 AMIGO2Q86SJ2 522 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 MEX3DQ86XN8 651 aaKnown RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 RNASE6Q93091 150 aaKnown RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 ZNF385AQ96PM9 386 aaKnown RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 NPDC1Q9NQX5 325 aaPredicted RBP17.13■□□□□ 0.33
PNKP-207ENST00000596014 TAS2R5Q9NYW4 299 aa17.13■□□□□ 0.33
PNKP-207ENST00000596014 SH3PXD2BA1X283 911 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 MRPL33O75394 65 aaKnown RBP17.12■□□□□ 0.33
PNKP-207ENST00000596014 OR6A2O95222 327 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 ADORA3P0DMS8 318 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 ZNF43P17038 809 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 MAKP20794 623 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 EDNRAP25101 427 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 OR3A2P47893 321 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 IL1RL1Q01638 556 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 MED21Q13503 144 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 TFAP2EQ6VUC0 442 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 STK32CQ86UX6 486 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 CDK20Q8IZL9 346 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 PAPD5Q8NDF8 572 aaKnown RBP17.12■□□□□ 0.33
PNKP-207ENST00000596014 OR4K5Q8NGD3 323 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 LRRC46Q96FV0 321 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 RBM24Q9BX46 236 aaKnown RBP17.12■□□□□ 0.33
PNKP-207ENST00000596014 Q9H521 79 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 PARPBPQ9NWS1 579 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 RAB26Q9ULW5 256 aa17.12■□□□□ 0.33
PNKP-207ENST00000596014 MAGEA13PA6NCF6 341 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 AHCYP23526 432 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 UQCRC1P31930 480 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 LIMS1P48059 325 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 ZP4Q12836 540 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 C1DQ13901 141 aaKnown RBP17.11■□□□□ 0.33
PNKP-207ENST00000596014 OR2T5Q6IEZ7 315 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 TMPRSS11FQ6ZWK6 438 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.11■□□□□ 0.33
PNKP-207ENST00000596014 NANOGNBQ7Z5D8 188 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 PXKQ7Z7A4 578 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 ZNF100Q8IYN0 542 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 OR2T29Q8NH02 315 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 TMEM45BQ96B21 275 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 FANCFQ9NPI8 374 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 PLEKHB1Q9UF11 243 aaPredicted RBP17.11■□□□□ 0.33
PNKP-207ENST00000596014 FOXD3Q9UJU5 478 aaPredicted RBP17.11■□□□□ 0.33
PNKP-207ENST00000596014 TMCC3Q9ULS5 477 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 LYVE1Q9Y5Y7 322 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 CENPEQ02224 2701 aa17.11■□□□□ 0.33
PNKP-207ENST00000596014 H0YJX3 145 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 BLOC1S5-TXNDC5H3BN57 136 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 SAGP10523 405 aaPredicted RBP17.1■□□□□ 0.33
PNKP-207ENST00000596014 HLA-DOBP13765 273 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 FASP25445 335 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 GPR4P46093 362 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 EXOC3L2Q2M3D2 409 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 AAED1Q7RTV5 226 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 UEVLDQ8IX04 471 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 APH1AQ96BI3 265 aa17.1■□□□□ 0.33
PNKP-207ENST00000596014 TMEM5Q9Y2B1 443 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms