RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PSMD4P55036 377 aaKnown RBP6.68□□□□□ -1.34
VMP1-213ENST00000591877 GANABQ14697 944 aaKnown RBP6.68□□□□□ -1.34
VMP1-213ENST00000591877 LASP1Q14847 261 aaKnown RBP6.68□□□□□ -1.34
VMP1-213ENST00000591877 GUSBP1Q15486 140 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 CD226Q15762 336 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 KRT71Q3SY84 523 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 VPS26BQ4G0F5 336 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 TNFAIP8L3Q5GJ75 292 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 TMEM154Q6P9G4 183 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 ZCCHC12Q6PEW1 402 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 ZNF474Q6S9Z5 364 aaPredicted RBP6.68□□□□□ -1.34
VMP1-213ENST00000591877 DCDC5Q6ZRR9 648 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 NUDCD3Q8IVD9 361 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 ZNF781Q8N8C0 355 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 GATSQ8NAP1 163 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 SETD9Q8NE22 299 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 FNDC9Q8TBE3 224 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 CDS1Q92903 461 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 ZNF524Q96C55 264 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 DTNBP1Q96EV8 351 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 ADGRG7Q96K78 797 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 SORT1Q99523 831 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 PIGQQ9BRB3 760 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 PINK1Q9BXM7 581 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 CADM1Q9BY67 442 aaKnown RBP6.68□□□□□ -1.34
VMP1-213ENST00000591877 TBL1XR1Q9BZK7 514 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 CXXC4Q9H2H0 198 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 PTGES2Q9H7Z7 377 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 ZCCHC3Q9NUD5 404 aaKnown RBP6.68□□□□□ -1.34
VMP1-213ENST00000591877 ASIC5Q9NY37 505 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 UPB1Q9UBR1 384 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 PACSIN3Q9UKS6 424 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 VDAC3Q9Y277 283 aa6.68□□□□□ -1.34
VMP1-213ENST00000591877 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 ACANP16112 2415 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 FREM1Q5H8C1 2179 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 NPIPA5A0A0B4J1W7 369 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 A0A1W2PRQ8 180 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 SLC22A20A6NK97 555 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 LINC00473A8K010 186 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 NPIPA7E9PJI5 369 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 EFNA2O43921 213 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 AQP8O94778 261 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 OPN1LWP04000 364 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 SERPINE1P05121 402 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 CRHP06850 196 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 ALOX5P09917 674 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 NPIPA8P0DM63 369 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 NR2F1P10589 423 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 IL11P20809 199 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 DRD4P21917 467 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 HPCAL1P37235 193 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 SLC6A8P48029 635 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 CCT3P49368 545 aaKnown RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 CLK3P49761 638 aaKnown RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 C21orf58P58505 322 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 HBA1P69905 142 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 SIRPAP78324 504 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 EMX2Q04743 252 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 FAM27E3Q08E93 113 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 PON3Q15166 354 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 CHI3L2Q15782 390 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 CTU2Q2VPK5 515 aaKnown RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 PLPPR5Q32ZL2 321 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 ATP6AP1LQ52LC2 224 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.67□□□□□ -1.34
VMP1-213ENST00000591877 CPTPQ5TA50 214 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 CBLN3Q6UW01 205 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 P4HA3Q7Z4N8 544 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 CAMKMTQ7Z624 323 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 COX18Q8N8Q8 333 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 FNDC5Q8NAU1 212 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 OR5AK3PQ8NH89 298 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 GOT1L1Q8NHS2 421 aaPredicted RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 ACTRT2Q8TDY3 377 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 OR5P2Q8WZ92 322 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 SMPDL3BQ92485 455 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 TUBGCP3Q96CW5 907 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 DAZAP1Q96EP5 407 aaKnown RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 ZIM3Q96PE6 472 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 FYTTD1Q96QD9 318 aaKnown RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 STACQ99469 402 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 ABHD14AQ9BUJ0 271 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 OPN3Q9H1Y3 402 aaPredicted RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 PIGMQ9H3S5 423 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 PIGUQ9H490 435 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 PLEKHF2Q9H8W4 249 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 RNF122Q9H9V4 155 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 UBQLN4Q9NRR5 601 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 MED17Q9NVC6 651 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 GIN1Q9NXP7 522 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 PEMTQ9UBM1 199 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 PLEKHA6Q9Y2H5 1048 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 AP4B1Q9Y6B7 739 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 RAI1Q7Z5J4 1906 aaPredicted RBP6.67□□□□□ -1.34
VMP1-213ENST00000591877 PRR14LQ5THK1 2151 aa6.67□□□□□ -1.34
VMP1-213ENST00000591877 C2CD3Q4AC94 2353 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 A0A0J9YW62 118 aa6.66□□□□□ -1.34
VMP1-213ENST00000591877 A0A1W2PQD3 144 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms