RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GLRX2Q9NS18 164 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 B3GAT1Q9P2W7 334 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
ATG4D-211ENST00000589753 NOX1Q9Y5S8 564 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 CDH10Q9Y6N8 788 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 COL6A6A6NMZ7 2263 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 SPTA1P02549 2419 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 GTF3C1Q12789 2109 aa13.52□□□□□ -0.24
ATG4D-211ENST00000589753 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 SERPINI2O75830 405 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 SOX14O95416 240 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 IL2RAP01589 272 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 F13BP05160 661 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 ALPLP05186 524 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 GLI4P10075 376 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 OSMP13725 252 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 ZNF26P17031 533 aaPredicted RBP13.52□□□□□ -0.25
ATG4D-211ENST00000589753 ZNF43P17038 809 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.25
ATG4D-211ENST00000589753 UQCRFS1P47985 274 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 FXYD6P3P58550 94 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 POU3F1Q03052 451 aaPredicted RBP13.52□□□□□ -0.25
ATG4D-211ENST00000589753 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.25
ATG4D-211ENST00000589753 RFX4Q33E94 735 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 SLC36A3Q495N2 470 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 TMEM211Q6ICI0 200 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 GALNT5Q7Z7M9 940 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 PARP8Q8N3A8 854 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 LRRC75AQ8NAA5 344 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 OR52L1Q8NGH7 329 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 GMPPAQ96IJ6 420 aaPredicted RBP13.52□□□□□ -0.25
ATG4D-211ENST00000589753 SAMD8Q96LT4 415 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 BCO1Q9HAY6 547 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 GP6Q9HCN6 339 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 C8orf4Q9NR00 106 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 IL20Q9NYY1 176 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 EMC3Q9P0I2 261 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.25
ATG4D-211ENST00000589753 CLEC4AQ9UMR7 237 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 MEMO1Q9Y316 297 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 SVILO95425 2214 aa13.52□□□□□ -0.25
ATG4D-211ENST00000589753 A0A1W2PRG6 482 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 ZNF724A8MTY0 619 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 MCIDASD6RGH6 385 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 H3BN98 237 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 CCL21O00585 134 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 GPR171O14626 319 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 MITFO75030 526 aaPredicted RBP13.51□□□□□ -0.25
ATG4D-211ENST00000589753 TOXO94900 526 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 TP53P04637 393 aaPredicted RBP13.51□□□□□ -0.25
ATG4D-211ENST00000589753 YES1P07947 543 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 IGFBP1P08833 259 aaPredicted RBP13.51□□□□□ -0.25
ATG4D-211ENST00000589753 HLA-DOBP13765 273 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 SLC6A6P31641 620 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 PER3P56645 1201 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 CTXN1P60606 82 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 PMPCAQ10713 525 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 FBXW10Q5XX13 1052 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 THSD4Q6ZMP0 1018 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 CREB3L2Q70SY1 520 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 IGFN1Q86VF2 1251 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 TUSC5Q8IXB3 177 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 MARVELD2Q8N4S9 558 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 PACRGLQ8N7B6 248 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 PRR7Q8TB68 274 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 TEX47Q8TBZ9 253 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 INTS12Q96CB8 462 aaKnown RBP13.51□□□□□ -0.25
ATG4D-211ENST00000589753 ZFP3Q96NJ6 502 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 DMRTA2Q96SC8 542 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 GPX7Q96SL4 187 aaPredicted RBP13.51□□□□□ -0.25
ATG4D-211ENST00000589753 TACO1Q9BSH4 297 aaKnown RBP13.51□□□□□ -0.25
ATG4D-211ENST00000589753 PLA2G12AQ9BZM1 189 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 ENKD1Q9H0I2 346 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 IL20RAQ9UHF4 553 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 ENOPH1Q9UHY7 261 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 FLVCR1Q9Y5Y0 555 aa13.51□□□□□ -0.25
ATG4D-211ENST00000589753 A0A1B0GUH1 482 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 TRAF3IP2O43734 574 aaPredicted RBP13.5□□□□□ -0.25
ATG4D-211ENST00000589753 SS18L1O75177 396 aaPredicted RBP13.5□□□□□ -0.25
ATG4D-211ENST00000589753 CD14P08571 375 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 IFNGR1P15260 489 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 CDH2P19022 906 aaPredicted RBP13.5□□□□□ -0.25
ATG4D-211ENST00000589753 POU1F1P28069 291 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
ATG4D-211ENST00000589753 RAD23AP54725 363 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 ESRRGP62508 458 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 CLEC12AQ5QGZ9 265 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 TMEM201Q5SNT2 666 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 RIPPLY2Q5TAB7 128 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 EEF1A1P5Q5VTE0 462 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 DPY19L2P2Q6ZN68 376 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 SLC35D2Q76EJ3 337 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 ZGRF1Q86YA3 2104 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 GCNT2Q8N0V5 402 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 GALNT4Q8N4A0 578 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 ZIC4Q8N9L1 334 aa13.5□□□□□ -0.25
ATG4D-211ENST00000589753 OR8D4Q8NGM9 314 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms