RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 GRK5P34947 590 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 PCYT1AP49585 367 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 H3F3AP84243 136 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 ZP4Q12836 540 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 Q96M85 177 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 GPX7Q96SL4 187 aaPredicted RBP12.98□□□□□ -0.33
NPC1-207ENST00000588867 ZNF226Q9NYT6 803 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 KLHL13Q9P2N7 655 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 ZNF346Q9UL40 294 aaKnown RBP12.98□□□□□ -0.33
NPC1-207ENST00000588867 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 A0A1B0GVC2 190 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 SURF4O15260 269 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 P2RY4P51582 365 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 AGFG1P52594 562 aaKnown RBP12.97□□□□□ -0.33
NPC1-207ENST00000588867 POU3F1Q03052 451 aaPredicted RBP12.97□□□□□ -0.33
NPC1-207ENST00000588867 LY6DQ14210 128 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 MAD2L1BPQ15013 274 aaPredicted RBP12.97□□□□□ -0.33
NPC1-207ENST00000588867 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 OR52E2Q8NGJ4 325 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 CPNE4Q96A23 557 aaPredicted RBP12.97□□□□□ -0.33
NPC1-207ENST00000588867 RASD2Q96D21 266 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 WDYHV1Q96HA8 205 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 CNTNAP3BQ96NU0 1288 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 CNTNAP3Q9BZ76 1288 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 TPRP12270 2363 aaKnown RBP12.97□□□□□ -0.33
NPC1-207ENST00000588867 ZZEF1O43149 2961 aa12.97□□□□□ -0.33
NPC1-207ENST00000588867 BOD1L1Q8NFC6 3051 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 ACACBO00763 2458 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 TEX13CA0A0J9YWL9 993 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 RIIAD1A6NNX1 92 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 AQP7O14520 342 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 DNPH1O43598 174 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 FZD7O75084 574 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 CPN1P15169 458 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.33
NPC1-207ENST00000588867 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 C1DQ13901 141 aaKnown RBP12.96□□□□□ -0.33
NPC1-207ENST00000588867 ACKR1Q16570 336 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 ARHGAP11AQ6P4F7 1023 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 PXKQ7Z7A4 578 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 UEVLDQ8IX04 471 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 RHOXF1Q8NHV9 184 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
NPC1-207ENST00000588867 SARAFQ96BY9 339 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 OXGR1Q96P68 337 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 TSPAN32Q96QS1 320 aa12.96□□□□□ -0.33
NPC1-207ENST00000588867 KIAA1549Q9HCM3 1950 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 ARPC3O15145 178 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 SMAD9O15198 467 aaKnown RBP12.96□□□□□ -0.34
NPC1-207ENST00000588867 IDH3BO43837 385 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 MPZL2O60487 215 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 SYNGR4O95473 234 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 SFTPCP11686 197 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 IFNGR1P15260 489 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 ZNF43P17038 809 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 KLRB1Q12918 225 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 MELKQ14680 651 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 PLXDC2Q6UX71 529 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.34
NPC1-207ENST00000588867 GHDCQ8N2G8 530 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 ZNF786Q8N393 782 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 LSM14AQ8ND56 463 aaKnown RBP12.96□□□□□ -0.34
NPC1-207ENST00000588867 GPR137Q96N19 417 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 PRRG4Q9BZD6 226 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 TXNIPQ9H3M7 391 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.34
NPC1-207ENST00000588867 B3GAT1Q9P2W7 334 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 RASD1Q9Y272 281 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 NOX1Q9Y5S8 564 aa12.96□□□□□ -0.34
NPC1-207ENST00000588867 A0A1W2PNV4 684 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 FAM183AA6NL82 134 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPC1-207ENST00000588867 BCL10O95999 233 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 IFNGP01579 166 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 RPSAP08865 295 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 SDHAP31040 664 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 FMO3P31513 532 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 ACVR1BP36896 505 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 RPL27P61353 136 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPC1-207ENST00000588867 PON3Q15166 354 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 ZNF239Q16600 458 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 SLC35D2Q76EJ3 337 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 FAM122BQ7Z309 247 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 JAZF1Q86VZ6 243 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 CYB561A3Q8NBI2 242 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 FAR1Q8WVX9 515 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 TXNDC15Q96J42 360 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 CMC2Q9NRP2 79 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 PNPLA3Q9NST1 481 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms