RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CPOQ8IVL8 374 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 OR52E2Q8NGJ4 325 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 OR4K13Q8NH42 304 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 ZNF582Q96NG8 517 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-209ENST00000588857 H2AFY2Q9P0M6 372 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-209ENST00000588857 A0A087WXM4 84 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 PRR23D1E9PI22 279 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 M0R3G1 203 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 SERPINI2O75830 405 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 PRR23D2P0DMB1 279 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 ATP6V1B1P15313 513 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 HIST1H1CP16403 213 aaKnown RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 ACVR2AP27037 513 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 SDHAP31040 664 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 ZNF169Q14929 603 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 TBR1Q16650 682 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 EMC4Q5J8M3 183 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 GPR139Q6DWJ6 353 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 ESPNLQ6ZVH7 1005 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 TMEM99Q8N816 258 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 ADPRHL1Q8NDY3 354 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 IPCEF1Q8WWN9 437 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 RFKQ969G6 155 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 WBP1Q96G27 269 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 Q96M85 177 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 MRPS26Q9BYN8 205 aaKnown RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 ACKR4Q9NPB9 350 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 PSORS1C1Q9UIG5 152 aa19.97■□□□□ 0.79
ATG4D-209ENST00000588857 RPL36Q9Y3U8 105 aaKnown RBP19.97■□□□□ 0.79
ATG4D-209ENST00000588857 A0A0J9YW62 118 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 TEX13CA0A0J9YWL9 993 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 A0A1W2PRG6 482 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 FAM183AA6NL82 134 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 CLCA1A8K7I4 914 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 KDM4EB2RXH2 506 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-209ENST00000588857 MS4A18H0YCH9 400 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 EIF1AYO14602 144 aaKnown RBP19.96■□□□□ 0.79
ATG4D-209ENST00000588857 TNFSF11O14788 317 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 SEC14L5O43304 696 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 STARP49675 285 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 ITGADQ13349 1161 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 MS4A18Q3C1V0 323 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 ZNF362Q5T0B9 420 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-209ENST00000588857 NXNL2Q5VZ03 156 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 PLBD1Q6P4A8 553 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 FAM122BQ7Z309 247 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 JAZF1Q86VZ6 243 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 UBQLNLQ8IYU4 475 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 RASD2Q96D21 266 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 TSPAN32Q96QS1 320 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 SLC6A15Q9H2J7 730 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 DUSP21Q9H596 190 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 CCNB1IP1Q9NPC3 277 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 HINT3Q9NQE9 182 aaKnown RBP19.96■□□□□ 0.79
ATG4D-209ENST00000588857 ZNF407Q9C0G0 2248 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 DNAJC13O75165 2243 aa19.96■□□□□ 0.79
ATG4D-209ENST00000588857 TFECO14948 347 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PRODHO43272 600 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 EIF1BO60739 113 aaKnown RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 TXNDC12O95881 172 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PLGP00747 810 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 SMIM18P0DKX4 95 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 CLDN20P56880 219 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 SLC35A2P78381 396 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 BLMHQ13867 455 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 CRMP1Q14194 572 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 AADACL4Q5VUY2 407 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 TMEM225Q6GV28 225 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF773Q6PK81 442 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PAQR6Q6TCH4 344 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 AHSA2Q719I0 299 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 KDM8Q8N371 416 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 SLC37A3Q8NCC5 494 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 SDR9C7Q8NEX9 313 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 MYDGFQ969H8 173 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 ZHX1-C8orf76Q96EF9 292 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 NAA11Q9BSU3 229 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 DEFB127Q9H1M4 99 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 LDAHQ9H6V9 325 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PAK1IP1Q9NWT1 392 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF346Q9UL40 294 aaKnown RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 EFCAB10A6NFE3 127 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 CLPTM1O96005 669 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 ITGB2P05107 769 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 ZNF24P17028 368 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 CARD18P57730 90 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 RPL27P61353 136 aaKnown RBP19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PMP22Q01453 160 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 ACKR1Q16570 336 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 RNFT1Q5M7Z0 435 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PDSS1Q5T2R2 415 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 HBMQ6B0K9 141 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 PXKQ7Z7A4 578 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 GGNQ86UU5 652 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 GID4Q8IVV7 300 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 CYB561A3Q8NBI2 242 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 GGHQ92820 318 aa19.95■□□□□ 0.78
ATG4D-209ENST00000588857 RHNO1Q9BSD3 238 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms