RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 GABARAPL3Q9BY60 117 aa16.29■□□□□ 0.2
H3F3B-206ENST00000587560 PLA2G12AQ9BZM1 189 aa16.29■□□□□ 0.2
H3F3B-206ENST00000587560 RNF122Q9H9V4 155 aa16.29■□□□□ 0.2
H3F3B-206ENST00000587560 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
H3F3B-206ENST00000587560 RASD1Q9Y272 281 aa16.29■□□□□ 0.2
H3F3B-206ENST00000587560 ZFHX3Q15911 3703 aa16.29■□□□□ 0.2
H3F3B-206ENST00000587560 NBASA2RRP1 2371 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 IGHV3-15A0A0B4J1V0 119 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 MBD3L4A6NDZ8 208 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 MBD3L3A6NE82 208 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 MBD3L5A6NJ08 208 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 VAMP5O95183 116 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 TPOP07202 933 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 IGFBP1P08833 259 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 IGFBP5P24593 272 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 ACVR2AP27037 513 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 PTDSS1P48651 473 aaKnown RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 NUP107P57740 925 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 PUDPQ08623 228 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 PMS2P3Q13401 168 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 RFX4Q33E94 735 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 C1orf185Q5T7R7 199 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 RPL13AP3Q6NVV1 102 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 SMARCD3Q6STE5 483 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 PXKQ7Z7A4 578 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 SLC43A2Q8N370 569 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 ZIC4Q8N9L1 334 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 MBD3L2Q8NHZ7 208 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 ZHX1-C8orf76Q96EF9 292 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 OXGR1Q96P68 337 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 OR52D1Q9H346 318 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 TP63Q9H3D4 680 aaPredicted RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 BCO1Q9HAY6 547 aa16.28■□□□□ 0.2
H3F3B-206ENST00000587560 MCTS1Q9ULC4 181 aaKnown RBP16.28■□□□□ 0.2
H3F3B-206ENST00000587560 NPIPB13A6NJU9 1138 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 SLC22A20A6NK97 555 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 FIGNL2A6NMB9 653 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 NPIPB4C9JG80 1138 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 PRRG2O14669 202 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 TRAF3IP2O43734 574 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-206ENST00000587560 TOXO94900 526 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 NDUFB2O95178 105 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 RCBTB2O95199 551 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 SYNGR4O95473 234 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 IGHMP01871 453 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 HIST1H2ABP04908 130 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 STSP08842 583 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 PRPS1P60891 318 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 ESRRGP62508 458 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 TLE1Q04724 770 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 RBPJQ06330 500 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 SF3B4Q15427 424 aaKnown RBP eCLIP16.27■□□□□ 0.29e-17■■■■□ 23.6
H3F3B-206ENST00000587560 LRRC36Q1X8D7 754 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 ZNF585AQ6P3V2 769 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 HIST3H2AQ7L7L0 130 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 FAM122BQ7Z309 247 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 RPRMLQ8N4K4 120 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 GALNT11Q8NCW6 608 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 FANK1Q8TC84 345 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 MAGEE2Q8TD90 523 aaPredicted RBP16.27■□□□□ 0.2
H3F3B-206ENST00000587560 ABHD3Q8WU67 409 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 HIST1H2ACQ93077 130 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 EGLN3Q9H6Z9 239 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 ZNF556Q9HAH1 456 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 GP6Q9HCN6 339 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 NRIP3Q9NQ35 241 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 KRT84Q9NSB2 600 aa16.27■□□□□ 0.2
H3F3B-206ENST00000587560 CENPEQ02224 2701 aa16.27■□□□□ 0.19
H3F3B-206ENST00000587560 MCIDASD6RGH6 385 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 H0YJX3 145 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 BLOC1S5-TXNDC5H3BN57 136 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 BHLHE40O14503 412 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 ADORA3P0DMS8 318 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 FCGR2AP12318 317 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 HLA-DOBP13765 273 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 GTF2E2P29084 291 aaKnown RBP16.26■□□□□ 0.19
H3F3B-206ENST00000587560 EPHA2P29317 976 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 CEACAM8P31997 349 aaPredicted RBP16.26■□□□□ 0.19
H3F3B-206ENST00000587560 TIMP3P35625 211 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 CA7P43166 264 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 CDK5Q00535 292 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 SLC36A3Q495N2 470 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 RPTNQ6XPR3 784 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 DPY19L2P2Q6ZN68 376 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 CHMP1BQ7LBR1 199 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 KDM8Q8N371 416 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 MARVELD2Q8N4S9 558 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 C9orf106Q8NAJ2 232 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 OR9K2Q8NGE7 335 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 SAMD8Q96LT4 415 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 RDH12Q96NR8 316 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 TRIB1Q96RU8 372 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 DMRTA2Q96SC8 542 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 MBOAT4Q96T53 435 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 KIF17Q9P2E2 1029 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 TINAGQ9UJW2 476 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 NOX1Q9Y5S8 564 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 FLVCR1Q9Y5Y0 555 aa16.26■□□□□ 0.19
H3F3B-206ENST00000587560 RP1L1Q8IWN7 2480 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms