RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 HSH2DQ96JZ2 352 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 PRRC1Q96M27 445 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 ALPK1Q96QP1 1244 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 CCL19Q99731 98 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 FKRPQ9H9S5 495 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 NANSQ9NR45 359 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 TAGLN3Q9UI15 199 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 RIMS3Q9UJD0 308 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 GMNNO75496 209 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 UPK3AO75631 287 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 ADORA3P0DMS8 318 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 NCK1P16333 377 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 CD53P19397 219 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF83P51522 516 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 MXRA7P84157 204 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 IFI44LQ53G44 452 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.33
ATG4D-207ENST00000587256 CARD17Q5XLA6 110 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 ADAM5Q6NVV9 412 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 KLHL17Q6TDP4 642 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 FKBP9P1Q75LS8 142 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 NANOGNBQ7Z5D8 188 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 NKAIN4Q8IVV8 208 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 RNF148Q8N7C7 305 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 PIK3C3Q8NEB9 887 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 TMEM255BQ8WV15 326 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 MBD6Q96DN6 1003 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 CCT8L2Q96SF2 557 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 PRSS27Q9BQR3 290 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 TMEM204Q9BSN7 226 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 LINC00470Q9BZP3 86 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 AMBRA1Q9C0C7 1298 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
ATG4D-207ENST00000587256 NPAP1Q9NZP6 1156 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF229Q9UJW7 825 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 AMDHD2Q9Y303 409 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 NOX1Q9Y5S8 564 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 SLC25A15Q9Y619 301 aa13.02□□□□□ -0.33
ATG4D-207ENST00000587256 PRR14LQ5THK1 2151 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 C11orf98E9PRG8 122 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 MS4A18H0YCH9 400 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 PLPP3O14495 311 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 HS3ST1O14792 307 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 HIST1H2ABP04908 130 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 THRBP10828 461 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 HLA-DOBP13765 273 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 UGT2B15P54855 530 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
ATG4D-207ENST00000587256 MS4A18Q3C1V0 323 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 HIKESHIQ53FT3 197 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 TMEM108Q6UXF1 575 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 SPNS3Q6ZMD2 512 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 CBLL1Q75N03 491 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 HIST3H2AQ7L7L0 130 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 KBTBD8Q8NFY9 601 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 PFN4Q8NHR9 129 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG4D-207ENST00000587256 HIST1H2ACQ93077 130 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 PIGTQ969N2 578 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 OR2M2Q96R28 347 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 SLC17A5Q9NRA2 495 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 ARL8BQ9NVJ2 186 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 MED29Q9NX70 200 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 NDE1Q9NXR1 346 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 EGFL7Q9UHF1 273 aa13.01□□□□□ -0.33
ATG4D-207ENST00000587256 MAGED1Q9Y5V3 778 aaPredicted RBP13.01□□□□□ -0.33
ATG4D-207ENST00000587256 F8P00451 2351 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 ROS1P08922 2347 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 DPRXA6NFQ7 191 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 M0R1B8 84 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 ABCD4O14678 606 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 RNF13O43567 381 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 ZNF432O94892 652 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 FAM107AO95990 144 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 WNT11O96014 354 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 MT-ND1P03886 318 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 YAP1P46937 504 aaKnown RBP13□□□□□ -0.33
ATG4D-207ENST00000587256 CDH11P55287 796 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 SH3BGRP55822 239 aaPredicted RBP13□□□□□ -0.33
ATG4D-207ENST00000587256 PRPS1P60891 318 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 SLC25A3Q00325 362 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 ST3GAL3Q11203 375 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 C16orf89Q6UX73 402 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 LINGO2Q7L985 606 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 PXKQ7Z7A4 578 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 OFCC1Q8IZS5 231 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 PGAM4Q8N0Y7 254 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 TMEM123Q8N131 208 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
ATG4D-207ENST00000587256 LRRC17Q8N6Y2 441 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 ANKS4BQ8N8V4 417 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 CCDC197Q8NCU1 140 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 OR1K1Q8NGR3 316 aa13□□□□□ -0.33
ATG4D-207ENST00000587256 FBXW5Q969U6 566 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms