RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 MFSD13AQ14CX5 517 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 RGNQ15493 299 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 FAM69AQ5T7M9 428 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 SERPINA11Q86U17 422 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 ARIH2OSQ8N7S6 290 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 PIK3C3Q8NEB9 887 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 OR6S1Q8NH40 331 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 SLC25A36Q96CQ1 311 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 ALKBH3Q96Q83 286 aaPredicted RBP13.02□□□□□ -0.33
VAPA-209ENST00000585042 DOK1Q99704 481 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 PTDSS2Q9BVG9 487 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 NELFAQ9H3P2 528 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 GPR35Q9HC97 309 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 RPS6KB2Q9UBS0 482 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 PCDHB14Q9Y5E9 798 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 A0A096LPE4 126 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 A0A1W2PPZ6 126 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 AIM2O14862 343 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 UBDO15205 165 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 AKAP8O43823 692 aaKnown RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 SASH3O75995 380 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 TGFAP01135 160 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 TACSTD2P09758 323 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 CALCRP30988 508 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 RPS5P46782 204 aaKnown RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 EVX1P49640 407 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 ARF1P84077 181 aaKnown RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 HGFACQ04756 655 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 C1DQ13901 141 aaKnown RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 H1FNTQ75WM6 255 aaPredicted RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 ZNF786Q8N393 782 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 ANKS4BQ8N8V4 417 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 ADPRHL1Q8NDY3 354 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 BBS10Q8TAM1 723 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 DNAJA4Q8WW22 397 aaPredicted RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 GTF2H4Q92759 462 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 SLC38A4Q969I6 547 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 KTI12Q96EK9 354 aaPredicted RBP13.01□□□□□ -0.33
VAPA-209ENST00000585042 LRR1Q96L50 414 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 MAGEB18Q96M61 343 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 B3GAT1Q9P2W7 334 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
VAPA-209ENST00000585042 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.01□□□□□ -0.331e-14■■■□□ 18.8
VAPA-209ENST00000585042 ZNF99A8MXY4 864 aaPredicted RBP13□□□□□ -0.33
VAPA-209ENST00000585042 hCG_2039718K7EN88 272 aa13□□□□□ -0.33
VAPA-209ENST00000585042 CLIC1O00299 241 aa13□□□□□ -0.33
VAPA-209ENST00000585042 DAOP14920 347 aa13□□□□□ -0.33
VAPA-209ENST00000585042 PRKAR1BP31321 381 aa13□□□□□ -0.33
VAPA-209ENST00000585042 THBS4P35443 961 aa13□□□□□ -0.33
VAPA-209ENST00000585042 CHN2P52757 468 aa13□□□□□ -0.33
VAPA-209ENST00000585042 CARTPTQ16568 116 aa13□□□□□ -0.33
VAPA-209ENST00000585042 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
VAPA-209ENST00000585042 FAM91A1Q658Y4 838 aa13□□□□□ -0.33
VAPA-209ENST00000585042 VHLLQ6RSH7 139 aa13□□□□□ -0.33
VAPA-209ENST00000585042 KDM8Q8N371 416 aa13□□□□□ -0.33
VAPA-209ENST00000585042 CKAP2Q8WWK9 683 aa13□□□□□ -0.33
VAPA-209ENST00000585042 BPESC1Q9GZL8 116 aa13□□□□□ -0.33
VAPA-209ENST00000585042 DENND2DQ9H6A0 471 aaPredicted RBP13□□□□□ -0.33
VAPA-209ENST00000585042 EVA1AQ9H8M9 152 aa13□□□□□ -0.33
VAPA-209ENST00000585042 CRLF2Q9HC73 371 aa13□□□□□ -0.33
VAPA-209ENST00000585042 USP22Q9UPT9 525 aa13□□□□□ -0.33
VAPA-209ENST00000585042 GMEB1Q9Y692 573 aa13□□□□□ -0.33
VAPA-209ENST00000585042 TRAV36DV7A0A075B6V5 113 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 IGHV2OR16-5A0A0B4J2B6 119 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 TMEM129A0AVI4 362 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
VAPA-209ENST00000585042 ATP8B1O43520 1251 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 MRPL19P49406 292 aaKnown RBP12.99□□□□□ -0.33
VAPA-209ENST00000585042 TUBA1BP68363 451 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 TUBA4AP68366 448 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 SLC9B1Q4ZJI4 515 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 C6orf10Q5SRN2 563 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 ULK3Q6PHR2 472 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 TUBA1AQ71U36 451 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 ZNF627Q7L945 461 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 SNX32Q86XE0 403 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 TMEM123Q8N131 208 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 MIER2Q8N344 545 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
VAPA-209ENST00000585042 TAAR8Q969N4 342 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 VPS33AQ96AX1 596 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 OR2M2Q96R28 347 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 SPATA5L1Q9BVQ7 753 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 C19orf24Q9BVV8 132 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 PAIP1Q9H074 479 aaKnown RBP12.99□□□□□ -0.33
VAPA-209ENST00000585042 CHODLQ9H9P2 273 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 B3GNT2Q9NY97 397 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 CORINQ9Y5Q5 1042 aa12.99□□□□□ -0.33
VAPA-209ENST00000585042 C5orf58C9J3I9 102 aa12.98□□□□□ -0.33
VAPA-209ENST00000585042 M0R082 166 aa12.98□□□□□ -0.33
VAPA-209ENST00000585042 NR4A1P22736 598 aa12.98□□□□□ -0.33
VAPA-209ENST00000585042 PPIBP23284 216 aaKnown RBP12.98□□□□□ -0.33
VAPA-209ENST00000585042 STX1BP61266 288 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms