RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 NPIPB8E9PQR5 432 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 TRAF3IP2O43734 574 aaPredicted RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 FCMRO60667 390 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 GPANK1O95872 356 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 IGHMP01871 453 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 ZNF35P13682 527 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 EFNA1P20827 205 aaPredicted RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 PTDSS1P48651 473 aaKnown RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 LOXL3P58215 753 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 COPZ1P61923 177 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 ETF1P62495 437 aaKnown RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 C1DQ13901 141 aaKnown RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 FAM189A2Q15884 450 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 CEACAM16Q2WEN9 425 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 ALKBH6Q3KRA9 238 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 ASPHD2Q6ICH7 369 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 BTNL3Q6UXE8 466 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 MYPOPQ86VE0 399 aaPredicted RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 CNPY4Q8N129 248 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 SPICQ8N5J4 248 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 DEFB108BQ8NET1 73 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 OR5D16Q8NGK9 328 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 SYNPRQ8TBG9 265 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 FBXO25Q8TCJ0 367 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 CCL17Q92583 94 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 ZNF48Q96MX3 618 aaPredicted RBP9.46□□□□□ -0.9
CASC3-208ENST00000583649 DIRC2Q96SL1 478 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 RASSF4Q9H2L5 321 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 NELFAQ9H3P2 528 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 OR5V1Q9UGF6 321 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 RNF114Q9Y508 228 aa9.46□□□□□ -0.9
CASC3-208ENST00000583649 A0A096LPI6 279 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 A8MVM7 634 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 SRRM5B3KS81 715 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 HOXA3O43365 443 aaPredicted RBP9.45□□□□□ -0.9
CASC3-208ENST00000583649 LYPLA1O75608 230 aaPredicted RBP9.45□□□□□ -0.9
CASC3-208ENST00000583649 UBL3O95164 117 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 SNRPAP09012 282 aaKnown RBP9.45□□□□□ -0.9
CASC3-208ENST00000583649 CSF1P09603 554 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 SBK3P0C264 359 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 PPIAL4GP0DN37 164 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 SELEP16581 610 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 FOXA1P55317 472 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 CLDN17P56750 224 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 BPIFB3P59826 476 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 RPL38P63173 70 aaKnown RBP9.45□□□□□ -0.9
CASC3-208ENST00000583649 PIGFQ07326 219 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 FXNQ16595 210 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 FAM219BQ5XKK7 198 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 FIP1L1Q6UN15 594 aaKnown RBP9.45□□□□□ -0.9
CASC3-208ENST00000583649 Q6ZPA2 131 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 RHOUQ7L0Q8 258 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 LRP11Q86VZ4 500 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 ZNF440Q8IYI8 595 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 PARP8Q8N3A8 854 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 TMEM151AQ8N4L1 468 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 CLHC1Q8NHS4 586 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 PPP1R14AQ96A00 147 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 DPY30Q9C005 99 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 LRMDAQ9H2I8 198 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 GPR35Q9HC97 309 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 NOX4Q9NPH5 578 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 ASH2LQ9UBL3 628 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 IL20RAQ9UHF4 553 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 BAIAP2L1Q9UHR4 511 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 LEF1Q9UJU2 399 aaPredicted RBP9.45□□□□□ -0.9
CASC3-208ENST00000583649 ZNF180Q9UJW8 692 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 POFUT2Q9Y2G5 429 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 GPR45Q9Y5Y3 372 aa9.45□□□□□ -0.9
CASC3-208ENST00000583649 PLSCR5A0PG75 271 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 CFAP73A6NFT4 308 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 TRIM49D1C9J1S8 452 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 FAAHO00519 579 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 C6orf47O95873 294 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 PTHP01270 115 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 HLA-HP01893 362 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 ZNF12P17014 697 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 ZNF14P17017 642 aaPredicted RBP9.44□□□□□ -0.9
CASC3-208ENST00000583649 RAB1AP62820 205 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 UNQ6126/PRO20091Q6UXV3 157 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 ZNF771Q7L3S4 317 aaPredicted RBP9.44□□□□□ -0.9
CASC3-208ENST00000583649 LINGO2Q7L985 606 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 OR5AK3PQ8NH89 298 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 KIF18AQ8NI77 898 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 SLC47A1Q96FL8 570 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 MS4A3Q96HJ5 214 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 SLC35G5Q96KT7 338 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 PAFAH2Q99487 392 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 TSPYL1Q9H0U9 437 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 C1orf198Q9H425 327 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 GSTO2Q9H4Y5 243 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 NANOGQ9H9S0 305 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 KIF17Q9P2E2 1029 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 MYEF2Q9P2K5 600 aaKnown RBP9.44□□□□□ -0.9
CASC3-208ENST00000583649 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 POLR3KQ9Y2Y1 108 aaPredicted RBP9.44□□□□□ -0.9
CASC3-208ENST00000583649 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
CASC3-208ENST00000583649 ZC3H12DA2A288 527 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms