RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	NXF5	Q9H1B4	397 aa	Known RBP	3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	PTGES2	Q9H7Z7	377 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	TIGAR	Q9NQ88	270 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	CCDC177	Q9NQR7	707 aa	Predicted RBP	3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	TXNDC16	Q9P2K2	825 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	POMP	Q9Y244	141 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	RAP2C	Q9Y3L5	183 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	CACNG2	Q9Y698	323 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	TNC	P24821	2201 aa		3.99	□□□□□ -1.77
MSI2-216	ENST00000582772	IGKV3D-15	A0A087WSY6	115 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ISPD	A4D126	451 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CXorf65	A6NEN9	183 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	OR51F1	A6NGY5	319 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	C17orf100	A8MU93	164 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772		H3BMM5	538 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	STX16-NPEPL1	H3BU86	382 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	SCD	O00767	359 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	AIM2	O14862	343 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	HDAC3	O15379	428 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	FGF17	O60258	216 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	OR1I1	O60431	355 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	FKBP6	O75344	327 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	H2AFY	O75367	372 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	EED	O75530	441 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF189	O75820	626 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ESRRB	O95718	433 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	UBTFL6	P0CB48	400 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	NAT2	P11245	290 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GPX3	P22352	226 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	PEX2	P28328	305 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CRABP2	P29373	138 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	SERPINB5	P36952	375 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CFHR2	P36980	270 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	PIK3CG	P48736	1102 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	RPL14	P50914	215 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	MANF	P55145	182 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CDKN2D	P55273	166 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	FOXG1	P55316	489 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CARD18	P57730	90 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GNB2	P62879	340 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	BTN3A2	P78410	334 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CCL8	P80075	99 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	MRPS35	P82673	323 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	MS4A2	Q01362	244 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GALK2	Q01415	458 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	PLCXD2	Q0VAA5	305 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	SNTB2	Q13425	540 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CEACAM7	Q14002	265 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	KLHL24	Q6TFL4	600 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	IZUMO2	Q6UXV1	221 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GALNT5	Q7Z7M9	940 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	DHDDS	Q86SQ9	333 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	LINC00523	Q86TU6	105 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	LSR	Q86X29	649 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	LMNTD2	Q8IXW0	634 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF100	Q8IYN0	542 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GPR137C	Q8N3F9	429 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	TBC1D19	Q8N5T2	526 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF645	Q8N7E2	425 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	HIPK4	Q8NE63	616 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	OR13J1	Q8NGT2	312 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	NPRL2	Q8WTW4	380 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ANKRD49	Q8WVL7	239 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	STON2	Q8WXE9	905 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	STMN2	Q93045	179 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CCDC124	Q96CT7	223 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	RCN3	Q96D15	328 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	SPDL1	Q96EA4	605 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF184	Q99676	751 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GPR21	Q99679	349 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CCDC28B	Q9BUN5	200 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	SSBP3	Q9BWW4	388 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	NUF2	Q9BZD4	464 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	MUC13	Q9H3R2	512 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	DSN1	Q9H410	356 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	EGLN3	Q9H6Z9	239 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	LYRM4	Q9HD34	91 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	TCF7L2	Q9NQB0	619 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	NLE1	Q9NVX2	485 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	LYAR	Q9NX58	379 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	GMPR2	Q9P2T1	348 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	FBXO5	Q9UKT4	447 aa		3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	CAB39	Q9Y376	341 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-216	ENST00000582772	IGLV3-32	A0A0A0MS00	114 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ARPC4-TTLL3	A0A0A6YYG9	625 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	IGHV2OR16-5	A0A0B4J2B6	119 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	PRSS51	A0A1B0GVH4	220 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	MROH6	A6NGR9	719 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	OR6C65	A6NJZ3	312 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	C17orf51	A8MQB3	221 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772		A8MT66	165 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	IQCF5	A8MTL0	148 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	FBP2	O00757	339 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ACOT8	O14734	319 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	CASQ2	O14958	399 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	T	O15178	435 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	NPHS1	O60500	1241 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	CYTIP	O60759	359 aa		3.97	□□□□□ -1.77
MSI2-216	ENST00000582772	ANXA9	O76027	345 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms