RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 EDN1P05305 212 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 PIPP12273 146 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 CCR9P51686 369 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 CATR1Q13166 79 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF266Q14584 549 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC35D3Q5M8T2 416 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 LRRC18Q8N456 261 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 TMEM38AQ9H6F2 299 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 TRABD2BA6NFA1 517 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 F3P13726 295 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 MYH10P35580 1976 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 ASAH1Q13510 395 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 C5orf46Q6UWT4 87 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 ADGRE4PQ86SQ3 457 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC22A24Q8N4F4 322 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 L3MBTL4Q8NA19 623 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 KCNG3Q8TAE7 436 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 LKAAEAR1Q8TD35 194 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 SPATA6Q9NWH7 488 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-217ENST00000581241 M0QYG6 137 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 CNMDO75829 334 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ATP1B1P05026 303 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 AADACP22760 399 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 FPR3P25089 353 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 REEP5Q00765 189 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ABHD17BQ5VST6 288 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 GDF7Q7Z4P5 450 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 SEC22CQ9BRL7 303 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ADAM19Q9H013 955 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 GABARAPL1Q9H0R8 117 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 GHRLQ9UBU3 117 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 A0A087WUU8 490 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF264O43296 627 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 CLN5O75503 358 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 TUSC2O75896 110 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 SRMP19623 302 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 OMGP23515 440 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 PAN3Q58A45 887 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 OVCH1Q7RTY7 1134 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 KDM8Q8N371 416 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 GMLQ99445 158 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 PIGMQ9H3S5 423 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 SLAMF7Q9NQ25 335 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 RAB22AQ9UL26 194 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 CA14Q9ULX7 337 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 USP3Q9Y6I4 520 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 CYB5BO43169 146 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ESPNLQ6ZVH7 1005 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 TEX19Q8NA77 164 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF75AQ96N20 296 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 BET1O15155 118 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 GIPP09681 153 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 CD53P19397 219 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 S100A7P31151 101 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 SOHLH1Q5JUK2 328 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 SHEQ5VZ18 495 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 Q6ZTK2 550 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 DMBX1Q8NFW5 382 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 NANPQ8TBE9 248 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 SLC7A6Q92536 515 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 NEURL3Q96EH8 262 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 NIPSNAP3BQ9BS92 247 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 PATZ1Q9HBE1 687 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 ASIC5Q9NY37 505 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 NCDNQ9UBB6 729 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 RGRP47804 291 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 BCDIN3DQ7Z5W3 292 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 NECAP2Q9NVZ3 263 aa13.48□□□□□ -0.25
CSNK1D-217ENST00000581241 H7C1C5 153 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 RPS19P39019 145 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 LCN6P62502 163 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 BAK1Q16611 211 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 PKDCCQ504Y2 493 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.47□□□□□ -0.252e-10■■□□□ 12.8
CSNK1D-217ENST00000581241 ZNF836Q6ZNA1 936 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF439Q8NDP4 499 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 CLEC2DQ9UHP7 191 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 SIX6O95475 246 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 NSA2O95478 260 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 CPT2P23786 658 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 NFYBP25208 207 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 GDF1P27539 372 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 IL2RGP31785 369 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 MTCP1P56278 107 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 ZNF595Q8IYB9 648 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 NKAIN3Q8N8D7 197 aa13.47□□□□□ -0.25
CSNK1D-217ENST00000581241 RNF170Q96K19 258 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms