RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 JMJD1CQ15652 2540 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 IGKV1D-42A0A075B6H8 117 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 IGHV4-30-2A0A087WSY4 118 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 A0A087WUJ7 227 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 A0A0B4J2E0 115 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 A0A1B0GX12 115 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 CPSF4LA6NMK7 179 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 EDF1O60869 148 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 SEC14L2O76054 403 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 AHCYP23526 432 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 PAX7P23759 505 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 SNRPD2P62316 118 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 ARF1P84077 181 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 RBBP4Q09028 425 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 NPRL3Q12980 569 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 PMS2P3Q13401 168 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 SELPLGQ14242 412 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 ADRM1Q16186 407 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 CEACAM16Q2WEN9 425 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 DLEU7Q6UYE1 221 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 LINGO2Q7L985 606 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 ZNF525Q8N782 197 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 VANGL1Q8TAA9 524 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 FAM168AQ92567 244 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 ANKRD27Q96NW4 1050 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 ZNF317Q96PQ6 595 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 SIKE1Q9BRV8 207 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 EVA1AQ9H8M9 152 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 CRLF2Q9HC73 371 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 GPR35Q9HC97 309 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 MOV10Q9HCE1 1003 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 B3GAT2Q9NPZ5 323 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 B3GAT1Q9P2W7 334 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 CORINQ9Y5Q5 1042 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 FKBP7Q9Y680 259 aa8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-212ENST00000573328 ARPC4-TTLL3A0A0A6YYG9 625 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 LRRN3E7EW58 273 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 C11orf98E9PRG8 122 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 H7C417 338 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 M0QX08 132 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 M0R3G1 203 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 KPNA4O00629 521 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 TRAF3IP2O43734 574 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 ZNF432O94892 652 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 MFN2O95140 757 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 OR6A2O95222 327 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 BGLAPP02818 100 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 VIMP08670 466 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 CECR9P0C854 216 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 TROVE2P10155 538 aaKnown RBP eCLIP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 IDH3GP51553 393 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 CDH12P55289 794 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 DSCR9P59020 149 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 NAAAQ02083 359 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 PUDPQ08623 228 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 SF3A3Q12874 501 aaKnown RBP eCLIP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 CARTPTQ16568 116 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 MMEL1Q495T6 779 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 SWT1Q5T5J6 900 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 INTS11Q5TA45 600 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 SLC46A3Q7Z3Q1 461 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 PATL1Q86TB9 770 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 PTOV1Q86YD1 416 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 SLC30A8Q8IWU4 369 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 DPP10Q8N608 796 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 SCAIQ8N9R8 606 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 ADPRHL1Q8NDY3 354 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 OR6N1Q8NGY5 312 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 OR10A6Q8NH74 314 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 MAGEE2Q8TD90 523 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 STON2Q8WXE9 905 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 BCL2L2Q92843 193 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 OR2M2Q96R28 347 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 VRK1Q99986 396 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 WFDC6Q9BQY6 131 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 EMC6Q9BV81 110 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 KATNB1Q9BVA0 655 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 TMEM120AQ9BXJ8 343 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 RSPO3Q9BXY4 272 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 NELFAQ9H3P2 528 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 ZNF385DQ9H6B1 395 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 MED29Q9NX70 200 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 GMEB1Q9Y692 573 aa8.41□□□□□ -1.06
NPLOC4-212ENST00000573328 SLC35F4A4IF30 521 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 ZNF726A6NNF4 738 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 ZNF99A8MXY4 864 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 RPL36A-HNRNPH2H7BZ11 118 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 CHP2O43745 196 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 TLX2O43763 284 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 CD5LO43866 347 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 LY6HO94772 140 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 HPRP00739 348 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 CELA3BP08861 270 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 CSF3P09919 207 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 ADORA3P0DMS8 318 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 UMPSP11172 480 aa8.4□□□□□ -1.06
NPLOC4-212ENST00000573328 CD79AP11912 226 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms