RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 AHSA1O95433 338 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 HLA-HP01893 362 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-206ENST00000572083 LIMS1P48059 325 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 EVX1P49640 407 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 SMU1Q2TAY7 513 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 COX20Q5RI15 118 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 PEX5LQ8IYB4 626 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 ESM1Q9NQ30 184 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 G6PC2Q9NQR9 355 aa17.04■□□□□ 0.32
CCDC40-206ENST00000572083 CD79AP11912 226 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 ADRA2CP18825 462 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 GTF2E2P29084 291 aaKnown RBP17.03■□□□□ 0.32
CCDC40-206ENST00000572083 RPS5P46782 204 aaKnown RBP17.03■□□□□ 0.32
CCDC40-206ENST00000572083 CHI3L2Q15782 390 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 LIN52Q52LA3 116 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 PDLIM3Q53GG5 364 aaPredicted RBP17.03■□□□□ 0.32
CCDC40-206ENST00000572083 ZNF311Q5JNZ3 666 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 RIBC1Q8N443 379 aaPredicted RBP17.03■□□□□ 0.32
CCDC40-206ENST00000572083 MFSD8Q8NHS3 518 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 TCP10LQ8TDR4 215 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 CCDC115Q96NT0 180 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 PTDSS2Q9BVG9 487 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 SUCNR1Q9BXA5 334 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 B3GAT1Q9P2W7 334 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 NOX1Q9Y5S8 564 aa17.03■□□□□ 0.32
CCDC40-206ENST00000572083 A0A096LPI6 279 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 TLDC2A0PJX2 215 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 CCDC154A6NI56 674 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 ZNF99A8MXY4 864 aaPredicted RBP17.02■□□□□ 0.32
CCDC40-206ENST00000572083 GSNP06396 782 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 NAT2P11245 290 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 CDKN2CP42773 168 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 TMEM33P57088 247 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 MYBPC1Q00872 1141 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 PIGFQ07326 219 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 MAPK11Q15759 364 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 ALKBH6Q3KRA9 238 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 PHYHD1Q5SRE7 291 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 OR52P1PQ8NH57 321 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 STK35Q8TDR2 534 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 OR2M2Q96R28 347 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 B3GNT2Q9NY97 397 aa17.02■□□□□ 0.32
CCDC40-206ENST00000572083 ZNF443Q9Y2A4 671 aaPredicted RBP17.02■□□□□ 0.32
CCDC40-206ENST00000572083 E9PBE3 544 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 M0R3G1 203 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 RP2O75695 350 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF35P13682 527 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF14P17017 642 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-206ENST00000572083 GLRXP35754 106 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 ANXA11P50995 505 aaKnown RBP17.01■□□□□ 0.31
CCDC40-206ENST00000572083 NME5P56597 212 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 EGR4Q05215 589 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 C1DQ13901 141 aaKnown RBP17.01■□□□□ 0.31
CCDC40-206ENST00000572083 GSG1Q2KHT4 349 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 DPY19L1Q2PZI1 675 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 TRMT5Q32P41 509 aaKnown RBP17.01■□□□□ 0.31
CCDC40-206ENST00000572083 AVPI1Q5T686 147 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 GKAP1Q5VSY0 366 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-206ENST00000572083 CARD17Q5XLA6 110 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 REP15Q6BDI9 236 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 C1QL2Q7Z5L3 287 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 CCDC36Q8IYA8 594 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 TMEM123Q8N131 208 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 TEX29Q8N6K0 151 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 TRIML2Q8N7C3 387 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 ZDHHC22Q8N966 263 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 PIK3C3Q8NEB9 887 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 KTI12Q96EK9 354 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-206ENST00000572083 OXGR1Q96P68 337 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 PANX1Q96RD7 426 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 TMPRSS13Q9BYE2 586 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF665Q9H7R5 613 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 BTNL2Q9UIR0 455 aa17.01■□□□□ 0.31
CCDC40-206ENST00000572083 PRKDCP78527 4128 aaKnown RBP17■□□□□ 0.31
CCDC40-206ENST00000572083 ITM2AO43736 263 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 MPZL1O95297 269 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 S100A3P33764 101 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 PTDSS1P48651 473 aaKnown RBP17■□□□□ 0.31
CCDC40-206ENST00000572083 CLNS1AP54105 237 aaKnown RBP17■□□□□ 0.31
CCDC40-206ENST00000572083 DEFA6Q01524 100 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 RNF220Q5VTB9 566 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 SERPINA11Q86U17 422 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 LRRC34Q8IZ02 419 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 CLIP4Q8N3C7 705 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 BPIFB2Q8N4F0 458 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF781Q8N8C0 355 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 TEX37Q96LM6 180 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF75AQ96N20 296 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 ZIM3Q96PE6 472 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF416Q9BWM5 594 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF696Q9H7X3 374 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 DUSP13Q9UII6 198 aa17■□□□□ 0.31
CCDC40-206ENST00000572083 DSPPQ9NZW4 1301 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 A0A0G2JMP0 313 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 A0A0X1KG70 313 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 A0A1W2PPW3 197 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 M0R082 166 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 BCHEP06276 602 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 BPGMP07738 259 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms