RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PROX1Q92786 737 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF583Q96ND8 569 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 TMEM43Q9BTV4 400 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 ALG2Q9H553 416 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 GMPR2Q9P2T1 348 aaKnown RBP15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 MGAT4BQ9UQ53 548 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 RCE1Q9Y256 329 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 CORINQ9Y5Q5 1042 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 ATP23Q9Y6H3 246 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 TRAPPC13A5PLN9 417 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR6C65A6NJZ3 312 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 C11orf98E9PRG8 122 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 M0R3G1 203 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 TRAF3IP2O43734 574 aaPredicted RBP15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 FZD7O75084 574 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 SEC14L2O76054 403 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF432O94892 652 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 LYPD3O95274 346 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 CH25HO95992 272 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 WNT11O96014 354 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 NPPAP01160 153 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 UBE2NP61088 152 aaKnown RBP15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 MFSD13AQ14CX5 517 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 TTC33Q6PID6 262 aaPredicted RBP15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 DEF8Q6ZN54 512 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 DEPDC4Q8N2C3 294 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 GPR137CQ8N3F9 429 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR6S1Q8NH40 331 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 RASSF5Q8WWW0 418 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 SLC41A3Q96GZ6 507 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 TXNDC15Q96J42 360 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR2M2Q96R28 347 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 LINC00470Q9BZP3 86 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 FAM107BQ9H098 131 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 MED29Q9NX70 200 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 FREM1Q5H8C1 2179 aa15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 RAI1Q7Z5J4 1906 aaPredicted RBP15.55■□□□□ 0.08
CTDNEP1-207ENST00000572043 HIVEP1P15822 2718 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 FAM220BPB1ANY3 271 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 ATP6V1G2-DDX39BF2Z307 99 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 OVOL3O00110 214 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 AKAP8O43823 692 aaKnown RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 CD8AP01732 235 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 PAX1P15863 534 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR1E2P47887 323 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 ARF1P84077 181 aaKnown RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 PUDPQ08623 228 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 CEACAM16Q2WEN9 425 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 PHYHD1Q5SRE7 291 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 ERICH5Q6P6B1 374 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 LINC00114Q6XXX2 140 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 SCAIQ8N9R8 606 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 ADPRHL1Q8NDY3 354 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR2T12Q8NG77 320 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 BCL2L2Q92843 193 aaPredicted RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF837Q96EG3 531 aaPredicted RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 TRMT61AQ96FX7 289 aaKnown RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 ELAC2Q9BQ52 826 aaKnown RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 BDH2Q9BUT1 245 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 TRAF4Q9BUZ4 470 aaPredicted RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 CRLF2Q9HC73 371 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 GPR35Q9HC97 309 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 FAIMQ9NVQ4 179 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 CMTM6Q9NX76 183 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 MRPL39Q9NYK5 338 aaKnown RBP15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 MOKQ9UQ07 419 aa15.54■□□□□ 0.08
CTDNEP1-207ENST00000572043 SLC35F4A4IF30 521 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 PLPP3O14495 311 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 CCDC22O60826 627 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 TMCC2O75069 709 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 NDUFS7O75251 213 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR6A2O95222 327 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 ADORA3P0DMS8 318 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 UMPSP11172 480 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 COX4I1P13073 169 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 FABP6P51161 128 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 SEC24CP53992 1094 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 TAS2R41P59536 307 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 VEZF1Q14119 521 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF74Q16587 644 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 ANKRD16Q6P6B7 361 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 CLEC9AQ6UXN8 241 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 BIVMQ86UB2 503 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 WDFY1Q8IWB7 410 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 TMEM123Q8N131 208 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 LRRC17Q8N6Y2 441 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 PIK3C3Q8NEB9 887 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR5J2Q8NH18 312 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 RP9Q8TA86 221 aaKnown RBP15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 TPD52L3Q96J77 140 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 DHRS9Q9BPW9 319 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 NELFAQ9H3P2 528 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 GDF2Q9UK05 429 aaPredicted RBP15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 BAG5Q9UL15 447 aa15.53■□□□□ 0.08
CTDNEP1-207ENST00000572043 CELSR1Q9NYQ6 3014 aa15.52■□□□□ 0.08
CTDNEP1-207ENST00000572043 IGHV1-18A0A0C4DH31 117 aa15.52■□□□□ 0.08
CTDNEP1-207ENST00000572043 LOC102725191A0A1B0GVB3 256 aa15.52■□□□□ 0.08
CTDNEP1-207ENST00000572043 ELOVL7A1L3X0 281 aa15.52■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF726A6NNF4 738 aa15.52■□□□□ 0.08
CTDNEP1-207ENST00000572043 SLC22A2O15244 555 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms