RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 HLA-DOBP13765 273 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 CBR1P16152 277 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 TCN1P20061 433 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 NPR2P20594 1047 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 HTR2AP28223 471 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 GRPRP30550 384 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 POLR2JP52435 117 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 AQP5P55064 265 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 PIGFQ07326 219 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 SNTB2Q13425 540 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 CCNIQ14094 377 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 RGNQ15493 299 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 EFNB3Q15768 340 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 ADRM1Q16186 407 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 GLIPR1L2Q4G1C9 344 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 TNFAIP8L3Q5GJ75 292 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 C10orf111Q8N326 155 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR4F15Q8NGB8 312 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 MS4A3Q96HJ5 214 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 BOD1Q96IK1 185 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 OXGR1Q96P68 337 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 DOK1Q99704 481 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 LINC00470Q9BZP3 86 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 PIF1Q9H611 641 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 ARMC7Q9H6L4 198 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 RMND5AQ9H871 391 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 NOX3Q9HBY0 568 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 GPR35Q9HC97 309 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 SDR39U1Q9NRG7 319 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 IFT52Q9Y366 437 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 PCDHB14Q9Y5E9 798 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 SVEP1Q4LDE5 3571 aa7.45□□□□□ -1.22
CTDNEP1-203ENST00000570385 WNK2Q9Y3S1 2297 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 IGKV1D-42A0A075B6H8 117 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEM129A0AVI4 362 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 C5orf58C9J3I9 102 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 LRRN3E7EW58 273 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 AIM2O14862 343 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 UBDO15205 165 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 TPST1O60507 370 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 LILRA1O75019 489 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 PDE5AO76074 875 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 IGKV3-15P01624 115 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 CD79AP11912 226 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 IFNGR1P15260 489 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 NQO1P15559 274 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 HNF1AP20823 631 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 APEX1P27695 318 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 AQP1P29972 269 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 SRP14P37108 136 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 PPOXP50336 477 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 SH3BGRP55822 239 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 DAG1Q14118 895 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 MSMPQ1L6U9 139 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 ALG10BQ5I7T1 473 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 C1QTNF12Q5T7M4 302 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 H1FNTQ75WM6 255 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 WDFY1Q8IWB7 410 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 MIER2Q8N344 545 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 C10orf53Q8N6V4 93 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF540Q8NDQ6 660 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 NUP37Q8NFH4 326 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 NFKBIDQ8NI38 313 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 MAGEE2Q8TD90 523 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 CKAP2Q8WWK9 683 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 GTF2H4Q92759 462 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 TXNDC15Q96J42 360 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 MAELQ96JY0 434 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR2M2Q96R28 347 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 SYT3Q9BQG1 590 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 WFDC6Q9BQY6 131 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 PAIP1Q9H074 479 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 NARFLQ9H6Q4 476 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 MYOZ1Q9NP98 299 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 MED29Q9NX70 200 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZIM2Q9NZV7 527 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLAMF8Q9P0V8 285 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 FZR1Q9UM11 496 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 RCE1Q9Y256 329 aa7.44□□□□□ -1.22
CTDNEP1-203ENST00000570385 VSTM5A8MXK1 200 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLCO1B7G3V0H7 640 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 MS4A18H0YCH9 400 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 RPL36A-HNRNPH2H7BZ11 118 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 TRAF3IP2O43734 574 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 ERCC1P07992 297 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 PATE4P0C8F1 98 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 B4GALT1P15291 398 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 GIFP27352 417 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 ARR3P36575 388 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 CHN2P52757 468 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 SEC24CP53992 1094 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 MAGOHP61326 146 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 POU3F1Q03052 451 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 SQLEQ14534 574 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 MAD2L1BPQ15013 274 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZSWIM7Q19AV6 140 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 C3orf36Q3SXR2 165 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 FAM69AQ5T7M9 428 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 RINLQ6ZS11 566 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms