RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF440Q8IYI8 595 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF417Q8TAU3 575 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 MAGEE2Q8TD90 523 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 SLC38A5Q8WUX1 472 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 HPS1Q92902 700 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 YIPF5Q969M3 257 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 VPS33AQ96AX1 596 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 TMEM19Q96HH6 336 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF587Q96SQ5 575 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 EMC6Q9BV81 110 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 LINC00470Q9BZP3 86 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 WDR55Q9H6Y2 383 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-220ENST00000569827 AIG1Q9NVV5 245 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 HIF1ANQ9NWT6 349 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 P2RX2Q9UBL9 471 aa10.39□□□□□ -0.75
CAPN3-220ENST00000569827 M0R233 179 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 SLC43A1O75387 559 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 VAMP5O95183 116 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 NAT2P11245 290 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 CD79AP11912 226 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 GRPRP30550 384 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 GPR6P46095 362 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-220ENST00000569827 MAP2K6P52564 334 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 SH3BGRP55822 239 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-220ENST00000569827 DSTNP60981 165 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 C1DQ13901 141 aaKnown RBP10.38□□□□□ -0.75
CAPN3-220ENST00000569827 C3orf36Q3SXR2 165 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-220ENST00000569827 TRIML2Q8N7C3 387 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 EIF1ADQ8N9N8 165 aaKnown RBP10.38□□□□□ -0.75
CAPN3-220ENST00000569827 MFSD8Q8NHS3 518 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 MAL2Q969L2 176 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 TMEM186Q96B77 213 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 ANKRD27Q96NW4 1050 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 ZIM3Q96PE6 472 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 LRRC37BQ96QE4 947 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 OR2M2Q96R28 347 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 RSPO3Q9BXY4 272 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-220ENST00000569827 OR51B6Q9H340 312 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 PIF1Q9H611 641 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 MEAF6Q9HAF1 191 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 CMAHPQ9Y471 501 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 PCDHB14Q9Y5E9 798 aa10.38□□□□□ -0.75
CAPN3-220ENST00000569827 LOC105371242A0A075B767 164 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 B4DSR2 109 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 RFXANKO14593 260 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 TRAF3IP2O43734 574 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 SERPINI2O75830 405 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 AVPP01185 164 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 PATE4P0C8F1 98 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 SAGP10523 405 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 B4GALT1P15291 398 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 EGR1P18146 543 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 NR4A1P22736 598 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 HTR2AP28223 471 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 EPHA3P29320 983 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 ARR3P36575 388 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 PTDSS1P48651 473 aaKnown RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 ANXA11P50995 505 aaKnown RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 CRISP3P54108 245 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 MPP2Q14168 576 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 AVPI1Q5T686 147 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 RNF220Q5VTB9 566 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 SHQ1Q6PI26 577 aaKnown RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 TMEM123Q8N131 208 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 STK35Q8TDR2 534 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 MRPL24Q96A35 216 aaKnown RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 OXGR1Q96P68 337 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF275Q9NSD4 429 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-220ENST00000569827 MED29Q9NX70 200 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF224Q9NZL3 707 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 REV1Q9UBZ9 1251 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 USP22Q9UPT9 525 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 RCE1Q9Y256 329 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 GPR45Q9Y5Y3 372 aa10.37□□□□□ -0.75
CAPN3-220ENST00000569827 IGKV1D-42A0A075B6H8 117 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 LRRN3E7EW58 273 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 RPL36A-HNRNPH2H7BZ11 118 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 PPIHO43447 177 aaKnown RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 SYNGR3O43761 229 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 CDC14BO60729 498 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 ANP32DO95626 131 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 KRT75O95678 551 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 GAAP10253 952 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 KITP10721 976 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 ADRA2CP18825 462 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 MAGEB1P43366 347 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 GIPRP48546 466 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 BST1Q10588 318 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 HNRNPA0Q13151 305 aaKnown RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 MFSD13AQ14CX5 517 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 LARS2Q15031 903 aaKnown RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF311Q5JNZ3 666 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 C1QTNF12Q5T7M4 302 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 FAHD2BQ6P2I3 314 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF813Q6ZN06 617 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms