RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 IDH3GP51553 393 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-213ENST00000565173 POLR2JP52435 117 aaKnown RBP7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SH3BGRP55822 239 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-213ENST00000565173 CLDN17P56750 224 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SRSF2Q01130 221 aaKnown RBP7.43□□□□□ -1.22
CAPN3-213ENST00000565173 FADDQ13158 208 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 GLIPR1L2Q4G1C9 344 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 PHYHD1Q5SRE7 291 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SLC2A7Q6PXP3 512 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SLC46A3Q7Z3Q1 461 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 WDFY1Q8IWB7 410 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 MSRB3Q8IXL7 192 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 TMEM123Q8N131 208 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 MGARPQ8TDB4 240 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 OR2M2Q96R28 347 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 KCNS3Q9BQ31 491 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 ARMC7Q9H6L4 198 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF442Q9H7R0 627 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 RMND5AQ9H871 391 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 CHODLQ9H9P2 273 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 C12orf10Q9HB07 376 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 TMBIM4Q9HC24 238 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 MYOZ1Q9NP98 299 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SLC52A3Q9NQ40 469 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 B3GNT2Q9NY97 397 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SLC25A37Q9NYZ2 338 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 SLAMF8Q9P0V8 285 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 KCNS2Q9ULS6 477 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 RCE1Q9Y256 329 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 TENM1Q9UKZ4 2725 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 IGHV2OR16-5A0A0B4J2B6 119 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 A0A1B0GWA3 101 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 LRP5LA4QPB2 252 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 M0R082 166 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 AIM2O14862 343 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 UBDO15205 165 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 TRAF3IP2O43734 574 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 TPST1O60507 370 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 TPST2O60704 377 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 LILRA1O75019 489 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 SLC43A1O75387 559 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 HPRP00739 348 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 TGFAP01135 160 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 TACSTD2P09758 323 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 HLA-DOBP13765 273 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 DAOP14920 347 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 SRD5A1P18405 259 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 GRPRP30550 384 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 PRKAR1BP31321 381 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 IL2RGP31785 369 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 MRPL19P49406 292 aaKnown RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 MAGOHP61326 146 aaKnown RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 CEACAM16Q2WEN9 425 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 C6orf10Q5SRN2 563 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 LRIF1Q5T3J3 769 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 FAM69AQ5T7M9 428 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 EPGNQ6UW88 154 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 H1FNTQ75WM6 255 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF627Q7L945 461 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 NET1Q7Z628 596 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 MDP1Q86V88 176 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 FUNDC1Q8IVP5 155 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 MIER2Q8N344 545 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 SVOPLQ8N434 492 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF540Q8NDQ6 660 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 BBS10Q8TAM1 723 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF417Q8TAU3 575 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 SLC38A4Q969I6 547 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 SLC41A3Q96GZ6 507 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF75AQ96N20 296 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF587Q96SQ5 575 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 WFDC6Q9BQY6 131 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 C19orf24Q9BVV8 132 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 VIPAS39Q9H9C1 493 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 CRLF2Q9HC73 371 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 MOV10Q9HCE1 1003 aaKnown RBP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 KLHL14Q9P2G3 628 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 GMEB1Q9Y692 573 aa7.42□□□□□ -1.22
CAPN3-213ENST00000565173 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.22
CAPN3-213ENST00000565173 TRAV36DV7A0A075B6V5 113 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 A0A087WUJ7 227 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 TRBV5-3A0A0A0MS03 114 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 TMEM247A6NEH6 219 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF99A8MXY4 864 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-213ENST00000565173 hCG_2039718K7EN88 272 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 OR2T1O43869 369 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 SEC14L2O76054 403 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 BGLAPP02818 100 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ARAFP10398 606 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 NPR2P20594 1047 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 CBLP22681 906 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ARR3P36575 388 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 RIN1Q13671 783 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ADRM1Q16186 407 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 CARTPTQ16568 116 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 IQCCQ4KMZ1 466 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms