RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 AGKQ53H12 422 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 PAGE3Q5JUK9 113 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
SPG7-210ENST00000564409 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 ARMC8Q8IUR7 673 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 HIPK4Q8NE63 616 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 SLC41A3Q96GZ6 507 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 LRR1Q96L50 414 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 GPR35Q9HC97 309 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 CA10Q9NS85 328 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 TMEM160Q9NX00 188 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 SLAMF8Q9P0V8 285 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 KLHL14Q9P2G3 628 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
SPG7-210ENST00000564409 ADAM21Q9UKJ8 722 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 ANGPT4Q9Y264 503 aa13.07□□□□□ -0.32
SPG7-210ENST00000564409 HMGB1P1B2RPK0 211 aaPredicted RBP13.06□□□□□ -0.32
SPG7-210ENST00000564409 M0R082 166 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 FMO6PO60774 539 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 C8BP07358 591 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 VIMP08670 466 aaKnown RBP13.06□□□□□ -0.32
SPG7-210ENST00000564409 CBR1P16152 277 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 GRPRP30550 384 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 ARR3P36575 388 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 NAAAQ02083 359 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 LGALS3BPQ08380 585 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 EFNB3Q15768 340 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 MST1LQ2TV78 715 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 TMEM249Q2WGJ8 235 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 PODNL1Q6PEZ8 512 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 DLEU7Q6UYE1 221 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 SLC30A8Q8IWU4 369 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 UEVLDQ8IX04 471 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 ZNF525Q8N782 197 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 C11orf65Q8NCR3 313 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 NUP37Q8NFH4 326 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 SPATA3Q8NHX4 192 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 ZNF417Q8TAU3 575 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 ZNF587Q96SQ5 575 aaPredicted RBP13.06□□□□□ -0.32
SPG7-210ENST00000564409 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 ASPNQ9BXN1 380 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 LEF1Q9UJU2 399 aaPredicted RBP13.06□□□□□ -0.32
SPG7-210ENST00000564409 TRIM33Q9UPN9 1127 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
SPG7-210ENST00000564409 IGKV1D-42A0A075B6H8 117 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 A0A0B4J2E0 115 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 A0A1B0GX12 115 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 ZNF99A8MXY4 864 aaPredicted RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 TRAF3IP2O43734 574 aaPredicted RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 TPST1O60507 370 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 MT-ATP6P00846 226 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 CECR9P0C854 216 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 PDLIM4P50479 330 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 OR1Q1Q15612 314 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 ADRM1Q16186 407 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 CHRFAM7AQ494W8 412 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 RUNDC3AQ59EK9 446 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 ZNF613Q6PF04 617 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 KDM8Q8N371 416 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 DPP10Q8N608 796 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 ZNF540Q8NDQ6 660 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 FBXO17Q96EF6 278 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 OR2M2Q96R28 347 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 MDFIQ99750 246 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 CPPED1Q9BRF8 314 aaPredicted RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 SIKE1Q9BRV8 207 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 RSPO3Q9BXY4 272 aaPredicted RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 NELFAQ9H3P2 528 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 IKZF5Q9H5V7 419 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 DENND2DQ9H6A0 471 aaPredicted RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 ZNF442Q9H7R0 627 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 CRLF2Q9HC73 371 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 INTS9Q9NV88 658 aaKnown RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 MRPL39Q9NYK5 338 aaKnown RBP13.05□□□□□ -0.32
SPG7-210ENST00000564409 CDC42EP3Q9UKI2 254 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 USP22Q9UPT9 525 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 DNHD1Q96M86 4753 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 ATRQ13535 2644 aa13.05□□□□□ -0.32
SPG7-210ENST00000564409 A0A096LPE4 126 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 A0A1W2PPZ6 126 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 LOC390937A0A1W2PQ73 354 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 MFN2O95140 757 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
SPG7-210ENST00000564409 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
SPG7-210ENST00000564409 PPOXP50336 477 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 PCBP3P57721 371 aaKnown RBP13.04□□□□□ -0.32
SPG7-210ENST00000564409 IL1RL1Q01638 556 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 CEACAM16Q2WEN9 425 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 C6orf52Q5T4I8 152 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 CYB5R2Q6BCY4 276 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 ZNF627Q7L945 461 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 CXXC5Q7LFL8 322 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms