RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RIMS3Q9UJD0 308 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ZNF225Q9UK10 706 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 RPS6KA6Q9UK32 745 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 IKZF3Q9UKT9 509 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 POMT2Q9UKY4 750 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SAMD4AQ9UPU9 718 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 AURKCQ9UQB9 309 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 WIF1Q9Y5W5 379 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 HEBP2Q9Y5Z4 205 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 PRSS21Q9Y6M0 314 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 COLEC10Q9Y6Z7 277 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 CPAMD8Q8IZJ3 1885 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 MED12Q93074 2177 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 DNAJC13O75165 2243 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CMYA5Q8N3K9 4069 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 EML6Q6ZMW3 1958 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 KIAA1549Q9HCM3 1950 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 A0A1B0GX78 115 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 GNG14A0A1W2PPG7 69 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 A0A1W2PPH5 198 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 GAGE10A6NGK3 116 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ANKDD1BA6NHY2 528 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 OR2AG2A6NM03 316 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 FAM166BA8MTA8 275 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ARHGEF33A8MVX0 844 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MAGEB17A8MXT2 336 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 FAM220BPB1ANY3 271 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 G3V2T6 193 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TRIM77I1YAP6 450 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZNF701M0R085 212 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 FXYD1O00168 92 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 BTN3A3O00478 584 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CXCR6O00574 342 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SMAD9O15198 467 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 CLOCKO15516 846 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 NME2P1O60361 137 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MRPS14O60783 128 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 WDR1O75083 606 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MTX2O75431 263 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SLC16A8O95907 504 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TGFAP01135 160 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 IGHV4-39P01824 125 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 HEXBP07686 556 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ANXA4P09525 319 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 SLC35G4P0C7Q5 338 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PABPC4LP0CB38 370 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 UBL4AP11441 157 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PSG1P11464 419 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 GPX2P18283 190 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CDH2P19022 906 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 GGT1P19440 569 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 EDN2P20800 178 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ACADLP28330 430 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 GPR12P47775 334 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ENTPD1P49961 510 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CCR8P51685 355 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CCR9P51686 369 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RAD23AP54725 363 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 AQP4P55087 323 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CDH12P55289 794 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RPS4XP62701 263 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 PPIAP62937 165 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 TRA2BP62995 288 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 SORDQ00796 357 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PLGLB1Q02325 96 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RBBP4Q09028 425 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MERTKQ12866 999 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 FADDQ13158 208 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 DYNC1I2Q13409 638 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 DCTN2Q13561 401 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 DOC2AQ14183 400 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 GNA13Q14344 377 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 KRT33BQ14525 404 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 HEPACAMQ14CZ8 416 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SF3B4Q15427 424 aaKnown RBP eCLIP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZIC1Q15915 447 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TSTQ16762 297 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ODF3L2Q3SX64 289 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 KCTD21Q4G0X4 260 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 LIN52Q52LA3 116 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 KLHL22Q53GT1 634 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SFT2D3Q587I9 215 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 NHSL2Q5HYW2 709 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PAGE3Q5JUK9 113 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SPANXN4Q5MJ08 99 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SERTAD4-AS1Q5TG53 156 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ASPHD1Q5U4P2 390 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 LPCAT4Q643R3 524 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 OR52E8Q6IFG1 317 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TRIM40Q6P9F5 258 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SCIMPQ6UWF3 145 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 LCTLQ6UWM7 567 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 UGT2A3Q6UWM9 527 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PLXDC2Q6UX71 529 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TMIGD1Q6UXZ0 262 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 WASH2PQ6VEQ5 465 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MBOAT1Q6ZNC8 495 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 FAM83HQ6ZRV2 1179 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 RPS27LQ71UM5 84 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 H1FNTQ75WM6 255 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms