RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 COPS4Q9BT78 406 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 LDAHQ9H6V9 325 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 EXO5Q9H790 373 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 RASD1Q9Y272 281 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 GPR52Q9Y2T5 361 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 NOX1Q9Y5S8 564 aa9.26□□□□□ -0.93
USP3-219ENST00000561326 TEX13CA0A0J9YWL9 993 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 LOC102725191A0A1B0GVB3 256 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 NPIPB13A6NJU9 1138 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 SLC22A31A6NKX4 558 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 KDM4EB2RXH2 506 aaPredicted RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 NPIPB4C9JG80 1138 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 NPIPA5E9PKD4 350 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 MS4A18H0YCH9 400 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 SLC2A10O95528 541 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 BCL10O95999 233 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ACTL6AO96019 429 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 PIPP12273 146 aaPredicted RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 HIST1H1CP16403 213 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 RFC3P40938 356 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 MAGEA5P43359 124 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 MTNR1AP48039 350 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 DAP3P51398 398 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 NUDT6P53370 316 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 CDH11P55287 796 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 CDH15P55291 814 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 GFRA1P56159 465 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 RAC3P60763 192 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 RPS3AP61247 264 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 ST3GAL4Q11206 333 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 C1DQ13901 141 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 ZNF169Q14929 603 aaPredicted RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 BCL2A1Q16548 175 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ZNF239Q16600 458 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 MS4A18Q3C1V0 323 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 GXYLT1Q4G148 440 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ZNF362Q5T0B9 420 aaPredicted RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 AADACL4Q5VUY2 407 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 HBMQ6B0K9 141 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 PLBD1Q6P4A8 553 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 AHSA2Q719I0 299 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 MEPCEQ7L2J0 689 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 PRSS48Q7RTY5 328 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 HDDC2Q7Z4H3 204 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ADCK1Q86TW2 530 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 UEVLDQ8IX04 471 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ARIH2OSQ8N7S6 290 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 TMEM99Q8N816 258 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 SLC37A3Q8NCC5 494 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 OR4K13Q8NH42 304 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 GGHQ92820 318 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ABTB1Q969K4 478 aaPredicted RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 RELTQ969Z4 430 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 Q96M85 177 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 AMBNQ9NP70 447 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 FANCFQ9NPI8 374 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 HINT3Q9NQE9 182 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 MRPS18AQ9NVS2 196 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 CHCHD3Q9NX63 227 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 PAQR5Q9NXK6 330 aaPredicted RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 ERVK-18Q9QC07 812 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 WARS2Q9UGM6 360 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 ZNF346Q9UL40 294 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 NPIPA1Q9UND3 350 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 ADAM18Q9Y3Q7 739 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 PCDHGB1Q9Y5G3 927 aa9.25□□□□□ -0.93
USP3-219ENST00000561326 PHF3Q92576 2039 aaKnown RBP9.25□□□□□ -0.93
USP3-219ENST00000561326 SVILO95425 2214 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 A0A0J9YW62 118 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 A0A1W2PNV4 684 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 AQP7P3A6NL99 342 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 TRIM64CA6NLI5 447 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 EIF1AYO14602 144 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 TFECO14948 347 aaPredicted RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 ARHGEF9O43307 516 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 AHCYL1O43865 530 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 SERPINI2O75830 405 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 FADS2O95864 444 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 IGHMP01871 453 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 ITGB2P05107 769 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 CDK1P06493 297 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 DBTP11182 482 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 ZNF43P17038 809 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 ENPP1P22413 925 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 SHC1P29353 583 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 HTR1FP30939 366 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 ACVR1BP36896 505 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 SLC15A1P46059 708 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 AGFG1P52594 562 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 SLC16A1P53985 500 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 RPS7P62081 194 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 HSF1Q00613 529 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 RAB40BQ12829 278 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 KRR1Q13601 381 aaKnown RBP9.24□□□□□ -0.93
USP3-219ENST00000561326 APOFQ13790 326 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 CRMP1Q14194 572 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 PON3Q15166 354 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 ACKR1Q16570 336 aa9.24□□□□□ -0.93
USP3-219ENST00000561326 TBR1Q16650 682 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms