RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ADORA3P0DMS8 318 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 THRBP10828 461 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 ST3GAL3Q11203 375 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 PLPPR2Q96GM1 343 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 USB1Q9BQ65 265 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 FNDC11Q9BVV2 318 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 ITGB1BP2Q9UKP3 347 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 SAMD4AQ9UPU9 718 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 RCE1Q9Y256 329 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 PRR14LQ5THK1 2151 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 OR5H1A6NKK0 313 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 PDLIM1O00151 329 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 UPK3AO75631 287 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 OR6A2O95222 327 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 FUT4P22083 530 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 CALB2P22676 271 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 FAM86B1Q8N7N1 296 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 OR52N5Q8NH56 324 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 EMC6Q9BV81 110 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 PLEKHF2Q9H8W4 249 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 C20orf141Q9NUB4 165 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 DCAF13Q9NV06 445 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 MED29Q9NX70 200 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 ZNF229Q9UJW7 825 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 MED31Q9Y3C7 131 aa17.53■□□□□ 0.4
TSPAN3-210ENST00000561277 CREBBPQ92793 2442 aa17.52■□□□□ 0.4
TSPAN3-210ENST00000561277 LOC102725191A0A1B0GVB3 256 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 A0A1W2PR80 420 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 ZNF587BE7ETH6 402 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 FFAR1O14842 300 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 ARPC2O15144 300 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 AKAP8O43823 692 aaKnown RBP17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 PIP5K1CO60331 668 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 HIST1H2ABP04908 130 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 MPGP29372 298 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 PPA1Q15181 289 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 TIMM23BQ5SRD1 257 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 CARD17Q5XLA6 110 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 HIST3H2AQ7L7L0 130 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 SLC46A3Q7Z3Q1 461 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 NANOGNBQ7Z5D8 188 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 ABHD12BQ7Z5M8 362 aaPredicted RBP17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 OFCC1Q8IZS5 231 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 HIST1H2ACQ93077 130 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 MUCL1Q96DR8 90 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 HS6ST2Q96MM7 605 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 GORASP2Q9H8Y8 452 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 PLEKHA6Q9Y2H5 1048 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 NOX1Q9Y5S8 564 aa17.52■□□□□ 0.39
TSPAN3-210ENST00000561277 OR6C65A6NJZ3 312 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 SLC43A1O75387 559 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 T-ENOLP0DO92 83 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 LOXP28300 417 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 NR1H2P55055 460 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 LSM11P83369 360 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 TGFBR3Q03167 851 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 TRAM2Q15035 370 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 GABRA6Q16445 453 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 FXNQ16595 210 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 RINLQ6ZS11 566 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 LINGO2Q7L985 606 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 CYP4Z1Q86W10 505 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 SGTBQ96EQ0 304 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 TXNDC15Q96J42 360 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 NSMCE2Q96MF7 247 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 OR2M2Q96R28 347 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 MAN2C1Q9NTJ4 1040 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 ST6GALNAC2Q9UJ37 374 aa17.51■□□□□ 0.39
TSPAN3-210ENST00000561277 CCDC168Q8NDH2 2452 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 RNF13O43567 381 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 OR7A10O76100 309 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 ZNF432O94892 652 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 ASAH2BP0C7U1 165 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 OR7E24Q6IFN5 339 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 TRPM8Q7Z2W7 1104 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 PXKQ7Z7A4 578 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 P2RY8Q86VZ1 359 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 UBTD1Q9HAC8 227 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 NGBQ9NPG2 151 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 TAS2R5Q9NYW4 299 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 ENPP4Q9Y6X5 453 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 OTOGQ6ZRI0 2925 aa17.5■□□□□ 0.39
TSPAN3-210ENST00000561277 SLC35F4A4IF30 521 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 BLOC1S5-TXNDC5H3BN57 136 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 hCG_2039718K7EN88 272 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 PRSS23O95084 383 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 FUT1P19526 365 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 ROR2Q01974 943 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 HMBOX1Q6NT76 420 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 SEZ6L2Q6UXD5 910 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 PAMR1Q6UXH9 720 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 TSEN54Q7Z6J9 526 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 TMEM123Q8N131 208 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 GPR137CQ8N3F9 429 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 PIK3C3Q8NEB9 887 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 C1orf162Q8NEQ5 155 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 MUS81Q96NY9 551 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 LINC00470Q9BZP3 86 aa17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 FAM32AQ9Y421 112 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-210ENST00000561277 PLAUP00749 431 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms