RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 A0A087WUJ7 227 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 ARPC4-TTLL3A0A0A6YYG9 625 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 PRORSD1PA6NEY8 169 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 A8MV72 311 aaPredicted RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 LRRN3E7EW58 273 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 M0QX08 132 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 M0R3G1 203 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 M0R3H8 397 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 TLX2O43763 284 aaPredicted RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 SEC14L2O76054 403 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 MFN2O95140 757 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 CELA3BP08861 270 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 CECR9P0C854 216 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 NQO1P15559 274 aaKnown RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 CALCRP30988 508 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 SERPINF1P36955 418 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 CDH12P55289 794 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 MTPNP58546 118 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 NAAAQ02083 359 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 PMS2P3Q13401 168 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 SELPLGQ14242 412 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 CARTPTQ16568 116 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 SWI5Q1ZZU3 235 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 CEACAM16Q2WEN9 425 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 FAM91A1Q658Y4 838 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 C5orf46Q6UWT4 87 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 PTOV1Q86YD1 416 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 UEVLDQ8IX04 471 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 ANKS4BQ8N8V4 417 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 MAGEE2Q8TD90 523 aaPredicted RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 C10orf105Q8TEF2 133 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 CKAP2Q8WWK9 683 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 TXNDC15Q96J42 360 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 MOGAT1Q96PD6 335 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 OR2M2Q96R28 347 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 TNFRSF13CQ96RJ3 184 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 MCHR1Q99705 422 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 VRK1Q99986 396 aaPredicted RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 KATNB1Q9BVA0 655 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 RABEP2Q9H5N1 569 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 CA10Q9NS85 328 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 LEF1Q9UJU2 399 aaPredicted RBP8.89□□□□□ -0.99
LDLR-214ENST00000560628 CORO2BQ9UQ03 480 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 RCE1Q9Y256 329 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 ANGPT4Q9Y264 503 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 NDUFAF1Q9Y375 327 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 GMEB1Q9Y692 573 aa8.89□□□□□ -0.99
LDLR-214ENST00000560628 A0A0B4J2E0 115 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 LOC102725191A0A1B0GVB3 256 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 A0A1B0GX12 115 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 ZNF503-AS2A6NEH8 195 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 HMGB1P1B2RPK0 211 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 RPL36A-HNRNPH2H7BZ11 118 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 TRAF3IP2O43734 574 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 SERPINI2O75830 405 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 IGLV1-44P01699 117 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 BGLAPP02818 100 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 OPN1SWP03999 348 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 OR4A8P0C604 315 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 HOXB1P14653 301 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 CBR1P16152 277 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 CAPZA2P47755 286 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 IDH3GP51553 393 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 SH3BGRP55822 239 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 SNRPD2P62316 118 aaKnown RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 HGFACQ04756 655 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 LOXL1Q08397 574 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 NPRL3Q12980 569 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 NFYCQ13952 458 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 ADIPOQQ15848 244 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 DUSP7Q16829 419 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 CYP51A1Q16850 503 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 TMEM249Q2WGJ8 235 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 HDXQ7Z353 690 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 SLC46A3Q7Z3Q1 461 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 DHDDSQ86SQ9 333 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 MYPOPQ86VE0 399 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 RANBP3LQ86VV4 465 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 HIPK1Q86Z02 1210 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 RBM45Q8IUH3 476 aaKnown RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 WDFY1Q8IWB7 410 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 TMEM123Q8N131 208 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 C11orf65Q8NCR3 313 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 PIK3C3Q8NEB9 887 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 GPR32P1Q8NGA4 272 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 MAGEB18Q96M61 343 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 ANKRD27Q96NW4 1050 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 SORCS2Q96PQ0 1159 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 EPYCQ99645 322 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 CGREF1Q99674 301 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 ASPNQ9BXN1 380 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 NPHS2Q9NP85 383 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 MED29Q9NX70 200 aa8.88□□□□□ -0.99
LDLR-214ENST00000560628 CRNNQ9UBG3 495 aaPredicted RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 TESQ9UGI8 421 aaKnown RBP8.88□□□□□ -0.99
LDLR-214ENST00000560628 SH3PXD2BA1X283 911 aa8.87□□□□□ -0.99
LDLR-214ENST00000560628 SLC35F4A4IF30 521 aa8.87□□□□□ -0.99
LDLR-214ENST00000560628 CPSF4LA6NMK7 179 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms