RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 MAD2L1BPQ15013 274 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 FXNQ16595 210 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 SMU1Q2TAY7 513 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 WDR93Q6P2C0 686 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF440Q8IYI8 595 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 LRRC17Q8N6Y2 441 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 MFSD8Q8NHS3 518 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 MECRQ9BV79 373 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF416Q9BWM5 594 aa16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 NOP53Q9NZM5 478 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF99A8MXY4 864 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 FZD7O75084 574 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 SLC43A1O75387 559 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 BCL10O95999 233 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 FSHBP01225 129 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 DBIP07108 87 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 ARAFP10398 606 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 PNMTP11086 282 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 ADRA2CP18825 462 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 MAPK11Q15759 364 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 ANXA8L1Q5VT79 327 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 WBP2NLQ6ICG8 309 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 NANPQ8TBE9 248 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 RNF217Q8TC41 542 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 SLC35A5Q9BS91 424 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 PTDSS2Q9BVG9 487 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF385DQ9H6B1 395 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF665Q9H7R5 613 aa16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-214ENST00000560163 J3QLI3 93 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 SEC14L2O76054 403 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 MPZL1O95297 269 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 HLA-HP01893 362 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF43P17038 809 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 EGR4Q05215 589 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 GNA13Q14344 377 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 ZNF311Q5JNZ3 666 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 PHYHD1Q5SRE7 291 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 RNF130Q86XS8 419 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 IFT20Q8IY31 132 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 TMEM123Q8N131 208 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 GPR137CQ8N3F9 429 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 STK35Q8TDR2 534 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 DVL3Q92997 716 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 TESCQ96BS2 214 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 SEC14L4Q9UDX3 406 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 OPN4Q9UHM6 478 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 RAB21Q9UL25 225 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 WNK2Q9Y3S1 2297 aa16.9■□□□□ 0.3
RABGGTA-214ENST00000560163 A0A096LPI6 279 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 A0A0G2JMP0 313 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 A0A0X1KG70 313 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 NAT2P11245 290 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 PRG2P13727 222 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 CHI3L1P36222 383 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 CAPZA2P47755 286 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 ZNF627Q7L945 461 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 CADM2Q8N3J6 435 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 BPIFB2Q8N4F0 458 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 VPS37AQ8NEZ2 397 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 OR4M2Q8NGB6 313 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 OXGR1Q96P68 337 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 OR2M2Q96R28 347 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 DPY30Q9C005 99 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 NTN4Q9HB63 628 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 MKS1Q9NXB0 559 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 ZNF224Q9NZL3 707 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 NOTCH1P46531 2555 aa16.89■□□□□ 0.29
RABGGTA-214ENST00000560163 SERPINB5P36952 375 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 MAGEB1P43366 347 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 GSG1Q2KHT4 349 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 TRMT5Q32P41 509 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 MIDNQ504T8 468 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 ZNF836Q6ZNA1 936 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 PIK3C3Q8NEB9 887 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 SLC25A36Q96CQ1 311 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 LRRC58Q96CX6 371 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 DDX28Q9NUL7 540 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 FZR1Q9UM11 496 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 CHST2Q9Y4C5 530 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 PPIAL4AQ9Y536 164 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 DSPPQ9NZW4 1301 aa16.88■□□□□ 0.29
RABGGTA-214ENST00000560163 LOC102725191A0A1B0GVB3 256 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 PRSS23O95084 383 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 COPZ1P61923 177 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 TXNL4AP83876 142 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 PIGFQ07326 219 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 SPANXN4Q5MJ08 99 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 PEX5LQ8IYB4 626 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 EPS8L3Q8TE67 593 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 C22orf15Q8WYQ4 148 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 KTI12Q96EK9 354 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 CCDC115Q96NT0 180 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 ZIM3Q96PE6 472 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 PARD6BQ9BYG5 372 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 AKTIPQ9H8T0 292 aa16.87■□□□□ 0.29
RABGGTA-214ENST00000560163 PPCSQ9HAB8 311 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms