RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 RASD1Q9Y272 281 aa16.16■□□□□ 0.18
CLPX-203ENST00000558958 ADAM18Q9Y3Q7 739 aa16.16■□□□□ 0.18
CLPX-203ENST00000558958 ARPC3O15145 178 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 DENRO43583 198 aaKnown RBP16.15■□□□□ 0.18
CLPX-203ENST00000558958 VAMP5O95183 116 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 HLA-DOBP13765 273 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 APEHP13798 732 aaKnown RBP16.15■□□□□ 0.18
CLPX-203ENST00000558958 GRK5P34947 590 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 RPS6KA3P51812 740 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 ERVK-25P63136 954 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 MYBPC1Q00872 1141 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 ZNF691Q5VV52 312 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 NHLRC1Q6VVB1 395 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 FAM122BQ7Z309 247 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 ANKK1Q8NFD2 765 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 OXGR1Q96P68 337 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 TUBA1CQ9BQE3 449 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 Q9H521 79 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 IER3IP1Q9Y5U9 82 aa16.15■□□□□ 0.18
CLPX-203ENST00000558958 IDH3BO43837 385 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 SYNGR4O95473 234 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 HMGN1P05114 100 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 CDC42P60953 191 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 ABLIM2Q6H8Q1 611 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 CASP12Q6UXS9 341 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 CHMP1BQ7LBR1 199 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 FAM81AQ8TBF8 368 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 ZPLD1Q8TCW7 415 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 ROBO4Q8WZ75 1007 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 ERMAPQ96PL5 475 aaPredicted RBP16.14■□□□□ 0.17
CLPX-203ENST00000558958 APOL4Q9BPW4 351 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 TEX12Q9BXU0 123 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 POLDIP3Q9BY77 421 aaKnown RBP16.14■□□□□ 0.17
CLPX-203ENST00000558958 TVP23BQ9NYZ1 205 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 MCTS1Q9ULC4 181 aaKnown RBP16.14■□□□□ 0.17
CLPX-203ENST00000558958 NOX1Q9Y5S8 564 aa16.14■□□□□ 0.17
CLPX-203ENST00000558958 A0A1W2PRG6 482 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 NPIPB13A6NJU9 1138 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 TTLL8A6PVC2 850 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 NPIPB4C9JG80 1138 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 IMPA2O14732 288 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 CYTIPO60759 359 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 SERPINI2O75830 405 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 TXNDC12O95881 172 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 PLGP00747 810 aaPredicted RBP16.13■□□□□ 0.17
CLPX-203ENST00000558958 IGHMP01871 453 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 ACADSP16219 412 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 MYF6P23409 242 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 PTGS2P35354 604 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 POU3F1Q03052 451 aaPredicted RBP16.13■□□□□ 0.17
CLPX-203ENST00000558958 SLC17A1Q14916 467 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 PON3Q15166 354 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 POU4F3Q15319 338 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 ACKR1Q16570 336 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 FCRLAQ7L513 359 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 ADGRE4PQ86SQ3 457 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 GPAT4Q86UL3 456 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 UEVLDQ8IX04 471 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 C8orf59Q8N0T1 100 aaPredicted RBP16.13■□□□□ 0.17
CLPX-203ENST00000558958 OR5M9Q8NGP3 310 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 SLC38A2Q96QD8 506 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 TSPAN32Q96QS1 320 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 SF3B5Q9BWJ5 86 aaKnown RBP16.13■□□□□ 0.17
CLPX-203ENST00000558958 PRRG3Q9BZD7 231 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 TXNIPQ9H3M7 391 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 KLHL13Q9P2N7 655 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 SVILO95425 2214 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 CACNA1BQ00975 2339 aa16.13■□□□□ 0.17
CLPX-203ENST00000558958 KIAA1549Q9HCM3 1950 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 CLCA1A8K7I4 914 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 M0R129 80 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 SURF4O15260 269 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 TRAF3IP2O43734 574 aaPredicted RBP16.12■□□□□ 0.17
CLPX-203ENST00000558958 NOS3P29474 1203 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 SDHAP31040 664 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 RPL27P61353 136 aaKnown RBP16.12■□□□□ 0.17
CLPX-203ENST00000558958 ISL1P61371 349 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 EFNB1P98172 346 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 TOP3AQ13472 1001 aaPredicted RBP16.12■□□□□ 0.17
CLPX-203ENST00000558958 SNAPC1Q16533 368 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 ZNF362Q5T0B9 420 aaPredicted RBP16.12■□□□□ 0.17
CLPX-203ENST00000558958 SLC35F1Q5T1Q4 408 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 GPR139Q6DWJ6 353 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 DEPDC4Q8N2C3 294 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 SETD9Q8NE22 299 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 FNDC9Q8TBE3 224 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 RNF128Q8TEB7 428 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 UBE2FQ969M7 185 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 Q96M85 177 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 CMC2Q9NRP2 79 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 PNPLA3Q9NST1 481 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 IMPAD1Q9NX62 359 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 GRHPRQ9UBQ7 328 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 ZNF346Q9UL40 294 aaKnown RBP16.12■□□□□ 0.17
CLPX-203ENST00000558958 ZNF175Q9Y473 711 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 HSPE1-MOB4S4R3N1 261 aa16.12■□□□□ 0.17
CLPX-203ENST00000558958 EPG5Q9HCE0 2579 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 TEX13CA0A0J9YWL9 993 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 ZNF716A6NP11 495 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 AHRRA9YTQ3 701 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms