RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 STARD8Q92502 1023 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 ELMO1Q92556 727 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 SMARCD2Q92925 531 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 MARC2Q969Z3 335 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 C16orf74Q96GX8 76 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 PLIN2Q99541 437 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 EBF4Q9BQW3 602 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 PYGO2Q9BRQ0 406 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 CENPKQ9BS16 269 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 TMEM59Q9BXS4 323 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 HES7Q9BYE0 225 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 PKIBQ9C010 78 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 C20orf85Q9H1P6 137 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 EHD1Q9H4M9 534 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 ISG20L2Q9H9L3 353 aaKnown RBP1.17□□□□□ -2.22
USP3-209ENST00000558925 ZNF160Q9HCG1 818 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 ADAP2Q9NPF8 381 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 DDX18Q9NVP1 670 aaKnown RBP1.17□□□□□ -2.22
USP3-209ENST00000558925 MARCH5Q9NX47 278 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 RAB20Q9NX57 234 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 GIN1Q9NXP7 522 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 QPCTLQ9NXS2 382 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 IL17CQ9P0M4 197 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 B4GALT7Q9UBV7 327 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 PITPNC1Q9UKF7 332 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 KIAA1257Q9ULG3 409 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 VANGL2Q9ULK5 521 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 TMCO1Q9UM00 188 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 TMED5Q9Y3A6 229 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 KANK1Q14678 1352 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 NINLQ9Y2I6 1382 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 PIKFYVEQ9Y2I7 2098 aa1.17□□□□□ -2.22
USP3-209ENST00000558925 TET2Q6N021 2002 aaPredicted RBP1.16□□□□□ -2.22
USP3-209ENST00000558925 TTC41PQ6P2S7 1318 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 WDR19Q8NEZ3 1342 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SH3TC1Q8TE82 1336 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 IGLV3-10A0A075B6K4 115 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 A0A075B6Q4 140 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 IGKV1D-13A0A0B4J2D9 117 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 PSMB11A5LHX3 300 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SMCO2A6NFE2 343 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 TCP11X1B4DZS4 312 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ERVV-1B6SEH8 477 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 CCL21O00585 134 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 HDAC3O15379 428 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 OR2J3O76001 311 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SUPT7LO94864 414 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 MOSP00540 346 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 IGHV2-5P01817 119 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 FGGP02679 453 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 KLK3P07288 261 aaPredicted RBP1.16□□□□□ -2.22
USP3-209ENST00000558925 ANXA5P08758 320 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 IGKV1-13P0DP09 117 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ANXA8P13928 327 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 FOLR1P15328 257 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 CD1EP15812 388 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ZNF19P17023 458 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 FUT3P21217 361 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 DCKP27707 260 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 IL12AP29459 219 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 FMO3P31513 532 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 NSG1P42857 185 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 BTDP43251 543 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SYKP43405 635 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 RPS5P46782 204 aaKnown RBP1.16□□□□□ -2.22
USP3-209ENST00000558925 NOVP48745 357 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 PRPS1P60891 318 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 RPS15P62841 145 aaKnown RBP1.16□□□□□ -2.22
USP3-209ENST00000558925 ASPHQ12797 758 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SLC1A5Q15758 541 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 CHRNA6Q15825 494 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ATP6AP1Q15904 470 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 MARCH8Q5T0T0 291 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 GPR157Q5UAW9 335 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ANXA8L1Q5VT79 327 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 METTL11BQ5VVY1 283 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SLC8B1Q6J4K2 584 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 CNIH2Q6PI25 160 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 TMEM220Q6QAJ8 160 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 CLEC2AQ6UVW9 174 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 BAIAP2L2Q6UXY1 529 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 TMIGD1Q6UXZ0 262 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SCARA5Q6ZMJ2 495 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 LRRC74BQ6ZQY2 392 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 Q6ZR54 194 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 PAQR7Q86WK9 346 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ZNF100Q8IYN0 542 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ZBED8Q8IZ13 594 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 TMEM61Q8N0U2 210 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 ZNF557Q8N988 423 aaPredicted RBP1.16□□□□□ -2.22
USP3-209ENST00000558925 NKAPP1Q8N9T2 125 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 C20orf203Q8NBC4 194 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 TRPV1Q8NER1 839 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 SPATA4Q8NEY3 305 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 OR10G3Q8NGC4 313 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 OR2AP1Q8NGE2 309 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 OR5B3Q8NH48 314 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 PYROXD1Q8WU10 500 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 OR1E3Q8WZA6 343 aa1.16□□□□□ -2.22
USP3-209ENST00000558925 RDH5Q92781 318 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms