RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 MTHFD2LQ9H903 347 aaPredicted RBP15.72■□□□□ 0.11
ABCD4-228ENST00000557588 RLIMQ9NVW2 624 aa15.72■□□□□ 0.11
ABCD4-228ENST00000557588 B3GNT2Q9NY97 397 aa15.72■□□□□ 0.11
ABCD4-228ENST00000557588 B3GAT1Q9P2W7 334 aa15.72■□□□□ 0.11
ABCD4-228ENST00000557588 ZDHHC2Q9UIJ5 367 aa15.72■□□□□ 0.11
ABCD4-228ENST00000557588 J3QLI3 93 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 SEC14L2O76054 403 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 AHSA1O95433 338 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 GKN3PP0CG01 181 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 HKR1P10072 659 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ZNF14P17017 642 aaPredicted RBP15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ZNF43P17038 809 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 CAPZA2P47755 286 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 SEC24CP53992 1094 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 RPS23P62266 143 aaKnown RBP15.71■□□□□ 0.11
ABCD4-228ENST00000557588 MAD2L1BPQ15013 274 aaPredicted RBP15.71■□□□□ 0.11
ABCD4-228ENST00000557588 FXNQ16595 210 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ZNF311Q5JNZ3 666 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ACSM5Q6NUN0 579 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 RNF130Q86XS8 419 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 TMEM123Q8N131 208 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 CADM2Q8N3J6 435 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 BPIFB2Q8N4F0 458 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 LRRC17Q8N6Y2 441 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 VPS37AQ8NEZ2 397 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 MFSD8Q8NHS3 518 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 STK35Q8TDR2 534 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ZNF75AQ96N20 296 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ZIM3Q96PE6 472 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 PTDSS2Q9BVG9 487 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 ZNF665Q9H7R5 613 aa15.71■□□□□ 0.11
ABCD4-228ENST00000557588 MYEF2Q9P2K5 600 aaKnown RBP15.71■□□□□ 0.11
ABCD4-228ENST00000557588 SMIM23A6NLE4 172 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 MPZL1O95297 269 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 BCL10O95999 233 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 FSHBP01225 129 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 ANXA11P50995 505 aaKnown RBP15.7■□□□□ 0.1
ABCD4-228ENST00000557588 COPZ1P61923 177 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 PDCD2Q16342 344 aaPredicted RBP15.7■□□□□ 0.1
ABCD4-228ENST00000557588 GSG1Q2KHT4 349 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 DPY19L1Q2PZI1 675 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 TREML4Q6UXN2 200 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 ZNF836Q6ZNA1 936 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 PEX5LQ8IYB4 626 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 KDM8Q8N371 416 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 PIK3C3Q8NEB9 887 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 OR2M2Q96R28 347 aa15.7■□□□□ 0.1
ABCD4-228ENST00000557588 ZNF346Q9UL40 294 aaKnown RBP15.7■□□□□ 0.1
ABCD4-228ENST00000557588 DSPPQ9NZW4 1301 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 PLPP2O43688 288 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 DEAF1O75398 565 aaPredicted RBP15.69■□□□□ 0.1
ABCD4-228ENST00000557588 HLA-HP01893 362 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 ADRA2CP18825 462 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 TRMT5Q32P41 509 aaKnown RBP15.69■□□□□ 0.1
ABCD4-228ENST00000557588 LIN52Q52LA3 116 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 SPANXN4Q5MJ08 99 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 RNF220Q5VTB9 566 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 ZNF627Q7L945 461 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 LRP11Q86VZ4 500 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 NANPQ8TBE9 248 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 EPS8L3Q8TE67 593 aaKnown RBP15.69■□□□□ 0.1
ABCD4-228ENST00000557588 RAB39BQ96DA2 213 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 CCDC115Q96NT0 180 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 OXGR1Q96P68 337 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 SEC14L4Q9UDX3 406 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 NOX1Q9Y5S8 564 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 VWFP04275 2813 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 WNK2Q9Y3S1 2297 aa15.69■□□□□ 0.1
ABCD4-228ENST00000557588 AKAP8O43823 692 aaKnown RBP15.68■□□□□ 0.1
ABCD4-228ENST00000557588 NR2F1P10589 423 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 NAT2P11245 290 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 GTF2E2P29084 291 aaKnown RBP15.68■□□□□ 0.1
ABCD4-228ENST00000557588 EGR4Q05215 589 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 MAPK11Q15759 364 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 TUSC1Q2TAM9 212 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 MMEL1Q495T6 779 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 VRK2Q86Y07 508 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 KIF18AQ8NI77 898 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 ANP32BQ92688 251 aaKnown RBP15.68■□□□□ 0.1
ABCD4-228ENST00000557588 C16orf45Q96MC5 204 aaPredicted RBP15.68■□□□□ 0.1
ABCD4-228ENST00000557588 NTN4Q9HB63 628 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 DDX28Q9NUL7 540 aaKnown RBP15.68■□□□□ 0.1
ABCD4-228ENST00000557588 SLC17A7Q9P2U7 560 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 BTNL2Q9UIR0 455 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 CORINQ9Y5Q5 1042 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 CMYA5Q8N3K9 4069 aa15.68■□□□□ 0.1
ABCD4-228ENST00000557588 A0A1W2PPW3 197 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 TRAF3IP2O43734 574 aaPredicted RBP15.67■□□□□ 0.1
ABCD4-228ENST00000557588 PRSS23O95084 383 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 NUDT17P0C025 328 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 ARAFP10398 606 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 PRG2P13727 222 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 RPS5P46782 204 aaKnown RBP15.67■□□□□ 0.1
ABCD4-228ENST00000557588 GALK2Q01415 458 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 C1DQ13901 141 aaKnown RBP15.67■□□□□ 0.1
ABCD4-228ENST00000557588 PHYHD1Q5SRE7 291 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 GKAP1Q5VSY0 366 aaPredicted RBP15.67■□□□□ 0.1
ABCD4-228ENST00000557588 GSPT2Q8IYD1 628 aaKnown RBP15.67■□□□□ 0.1
ABCD4-228ENST00000557588 OR52P1PQ8NH57 321 aa15.67■□□□□ 0.1
ABCD4-228ENST00000557588 RNF217Q8TC41 542 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 1230.5 ms