RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 GPR137CQ8N3F9 429 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 ADPRHL1Q8NDY3 354 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 RNF217Q8TC41 542 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 C10orf105Q8TEF2 133 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 TAAR8Q969N4 342 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 SLC47A1Q96FL8 570 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 EPYCQ99645 322 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 RSPO3Q9BXY4 272 aaPredicted RBP12.34□□□□□ -0.43
SNX6-210ENST00000557341 IKZF5Q9H5V7 419 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 SLC52A3Q9NQ40 469 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 KLHL14Q9P2G3 628 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 ANGPT4Q9Y264 503 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 IGKV1D-42A0A075B6H8 117 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 TRAF3IP2O43734 574 aaPredicted RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 TPST1O60507 370 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 SERPINB7O75635 380 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 IGLV1-44P01699 117 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 GPX2P18283 190 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 AQP1P29972 269 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 VLDLRP98155 873 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 TTMPQ5BVD1 217 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 H1FNTQ75WM6 255 aaPredicted RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 NET1Q7Z628 596 aaPredicted RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 ARMC8Q8IUR7 673 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 FAM169BQ8N8A8 192 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 HIPK4Q8NE63 616 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 PROX1Q92786 737 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 CPPED1Q9BRF8 314 aaPredicted RBP12.33□□□□□ -0.44
SNX6-210ENST00000557341 RABEP2Q9H5N1 569 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 CRLF2Q9HC73 371 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 CORINQ9Y5Q5 1042 aa12.33□□□□□ -0.44
SNX6-210ENST00000557341 A0A087WUJ7 227 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 A0A0B4J2E0 115 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 LOC102725191A0A1B0GVB3 256 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 A0A1B0GX12 115 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 LY6HO94772 140 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 F12P00748 615 aaPredicted RBP12.32□□□□□ -0.44
SNX6-210ENST00000557341 CBLP22681 906 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 SERPINF1P36955 418 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
SNX6-210ENST00000557341 MST1LQ2TV78 715 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 CEACAM16Q2WEN9 425 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
SNX6-210ENST00000557341 PODNL1Q6PEZ8 512 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 DHDDSQ86SQ9 333 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 UEVLDQ8IX04 471 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 SCAIQ8N9R8 606 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 OR4F15Q8NGB8 312 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 OR6S1Q8NH40 331 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 STON2Q8WXE9 905 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 PRR14Q9BWN1 585 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 ASPNQ9BXN1 380 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 TMEM27Q9HBJ8 222 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 GPR35Q9HC97 309 aa12.32□□□□□ -0.44
SNX6-210ENST00000557341 LEF1Q9UJU2 399 aaPredicted RBP12.32□□□□□ -0.44
SNX6-210ENST00000557341 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 B9A039 149 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 NDUFS8O00217 210 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 IFNA2P01563 188 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 USF1P22415 310 aaPredicted RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 CALCRP30988 508 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 PDLIM4P50479 330 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 IDH3GP51553 393 aaPredicted RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 OR1Q1Q15612 314 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 EFNB3Q15768 340 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 ADIPOQQ15848 244 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 ADRM1Q16186 407 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 CYP51A1Q16850 503 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 VHLLQ6RSH7 139 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 DLEU7Q6UYE1 221 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 C11orf65Q8NCR3 313 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 NUP37Q8NFH4 326 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 NANOS1Q8WY41 292 aaKnown RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 SLC41A3Q96GZ6 507 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 PIMREGQ9BSJ6 248 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 TMEM43Q9BTV4 400 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 MYOZ1Q9NP98 299 aaPredicted RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 INTS9Q9NV88 658 aaKnown RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 FBXO9Q9UK97 447 aaPredicted RBP12.31□□□□□ -0.44
SNX6-210ENST00000557341 CDC42EP3Q9UKI2 254 aa12.31□□□□□ -0.44
SNX6-210ENST00000557341 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 M0R3G1 203 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 ANGPT2O15123 496 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms